| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2754 |
|---|
| Symbol | |
|---|
| ID | 8326943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3173871 |
|---|
| End bp | 3175268 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644943292 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003100533 |
|---|
| Protein GI | 256376873 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.182715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGT TGGCCCGTTT GGACCGCCTG CCGCTGAGCC GTCCCCACTA CGGCCTGCTG
CTCATCGGCG GTCTCGGCTA CACCTTCGAC GGCATGGACT CCGCCGTCGT GGCCTTCCTG
CTGCCCAGCG TCCAGCAGGT GTGGGGCCTG GACAACGGGC ACCTCGGCCT GATCGGCTCG
GCCACCCCGT TCGGCTTCCT GTTCGGCGCG GCCATCGCGG GCCTGCTCGG CGACCGCATC
GGCCGCAAGA AGGTCATGAT GTACGCCCTG GCCTTCTACG CGGTGTTCTC CGTGGTCGCC
GCCTTCTCGC CCAACTACGA GGTCTTCCTC GGCGCGCGGG TCCTGGCCGG CGCGGGCGCG
GGCGCGGAGA GCGCGATCAT CGCCCCGTTC CTGTCCGAGT TCGTCCCCGC CAAGCGGCGC
GGCTGGTTCG TCGGCGCGCT CGCCGGGTTC TTCTCGTTCG GCTTCGTCAT GGCCGCCCTG
ATCGGCCGGT TCGTCGTCCC CGCCTCCGAG GACGGCTGGC GCATCGCCCA GCTCATCACC
GCCCTGCCGA TCGTGATGCT GCTCTGGTGG CGGCGCTCGC TCCCGGAGTC CCCGCGCTTC
CTGCTCCAGC AGGGCAAGAC CGCCGAGGCC GAGAAGGTCG TCGCCGACCT GGAGGCCCGC
GTCGAGAAGG CCACCCGCCA GCCGCTCCCG CCGGTCGAGG AGAGCGCCAC CGCCACCGGA
CCGGTCGCCG ACACCCCCAA GGTCACGCTG CTCAGCGCGC TGAAGTTCCT GTGGAGCCCG
GCGATGGCCA AGCGCACCGC GGTGATCTGG CTGATCTGGT TCGTGATCAC CTTCTCCTAC
TACGGCTTCT TCTCCTGGAT CCCGACCCTG CTGGTCCAGC GCGGCATCAC GGTTACCAAG
AGCTTCGAGT TCTCGATCAT CATCTACCTG GCGCAGATCC CCGGCTACTT CTCCGCCGCC
TGGCTCACCG AGCGCCTGGA CCGCAAGAAC ACCATCGCCC TCTACCTCGC GGGCTCGGCG
GTCAGCGCGT TCTGGCTGTC CCAGACCGAG ACCCCGCTGA CGATCACCCT CGCGGGCGCG
GTGCTGTCGT TCTTCCTCAA CGGCACCTAC GCGGGCGTCT ACTCCTACAC CCCCGAGGTG
TTCCCGACCT GGGTCCGCGC CACCGGCACC GGCCTGTCCA GCGCGTTCGG CCGCATCGGC
AGCATCCTCG CGCCCACCAT CATCGGCCTG TCCGCCGCCA GCCTCGGCTT CGCGGGCGTC
TTCGGCCTCA CCACGGCGGT GCTGGTGGTC GGCGTGGTGT GCGTGGTGGT GTTCGGCCTG
TCCACGGCGG GACGATCCCT GGAAGACCTG ACCGAGCGGG GCGGACCCGC CGACACCGCG
AAGGAGATGG CCAAGTGA
|
|---|
| Protein sequence | MSLLARLDRL PLSRPHYGLL LIGGLGYTFD GMDSAVVAFL LPSVQQVWGL DNGHLGLIGS
ATPFGFLFGA AIAGLLGDRI GRKKVMMYAL AFYAVFSVVA AFSPNYEVFL GARVLAGAGA
GAESAIIAPF LSEFVPAKRR GWFVGALAGF FSFGFVMAAL IGRFVVPASE DGWRIAQLIT
ALPIVMLLWW RRSLPESPRF LLQQGKTAEA EKVVADLEAR VEKATRQPLP PVEESATATG
PVADTPKVTL LSALKFLWSP AMAKRTAVIW LIWFVITFSY YGFFSWIPTL LVQRGITVTK
SFEFSIIIYL AQIPGYFSAA WLTERLDRKN TIALYLAGSA VSAFWLSQTE TPLTITLAGA
VLSFFLNGTY AGVYSYTPEV FPTWVRATGT GLSSAFGRIG SILAPTIIGL SAASLGFAGV
FGLTTAVLVV GVVCVVVFGL STAGRSLEDL TERGGPADTA KEMAK
|
|---|
| |