Gene Amir_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2645 
Symbol 
ID8326834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2978443 
End bp2979207 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content75% 
IMG OID644943185 
ProductGntR domain protein 
Protein accessionYP_003100426 
Protein GI256376766 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCGT TTTCCAAGGA CCCCATCACC GGTCTCCCCG AGGCCATCGG CGACGTCCAC 
ACCGGTGGCT CGCTCGCCGC CGGGGTCGCC CAGGCGCTCC TCGCCCACTT CACCCAGGGC
GGGGTGTCCG CCGGGGAGCG CCTCCCCCCG GAGCGCGCCC TGGCCTCGGC GCTCGGCGTC
GGCCGCTCCG CCGTGCGCGA GGCGCTGGCC GCGCTGGAGC TGCTCGGCGT CGTGGTGGTC
AAACCCGGCT CCGGCACGTA CCTGCGCGGC GACGCCTCCG AGCTGCTGCC CAAGACGCTG
AGCTGGGGCT TGATGCTCGG CGAGCCGCAG ACCCAGGAGC TGATCGAGGT CCGCCACGGC
CTGGAGACGT ACGCGGTGCG GCTGGCCGCG AGCCGGGTCG GCGACGAGGA GCTGGCGCGG
CTGGGCGGGT ACGTCGACAC CATGCGCGCC TCGGTCGACG ACCTGGAGCG GTTCGTCGAG
GCCGACATGA TGTTCCACAT GGACATCGGC CACATCGCGG GCAACGAGGT CCTGCACCAC
CTGCTGCAGA GCATCCGGTC GCTGATCCGG GTGTGGGTCG AGCGCGGCCT GCGCGACCGG
CCGCACGCGG AGCTGTCGAT CCAGGAGCAC AGCCGCGTGC TGGAGGCGCT GAGGGCGCGG
GACCCGCAGG CCGCCGCCGA GGCGATGGCC GCGCACATGA CGACGGCGGG TCTGCGGCTG
AGCAGCTCGC TGCCGTCCGG GGGCGCGCGG GCGGGCGACG CCTGA
 
Protein sequence
MPAFSKDPIT GLPEAIGDVH TGGSLAAGVA QALLAHFTQG GVSAGERLPP ERALASALGV 
GRSAVREALA ALELLGVVVV KPGSGTYLRG DASELLPKTL SWGLMLGEPQ TQELIEVRHG
LETYAVRLAA SRVGDEELAR LGGYVDTMRA SVDDLERFVE ADMMFHMDIG HIAGNEVLHH
LLQSIRSLIR VWVERGLRDR PHAELSIQEH SRVLEALRAR DPQAAAEAMA AHMTTAGLRL
SSSLPSGGAR AGDA