| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2574 |
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| Symbol | |
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| ID | 8326763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2906250 |
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| End bp | 2907599 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644943116 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100357 |
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| Protein GI | 256376697 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.316894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCA CCAGCCGCCG CGCGCGGGTG GCCGTGGCGA TGGCCGCCGC GCTCACCACC
GCGCTCACCG CCTGCTCCTC CGGCGACACC GCCGCGAACC AGCCGGCGGG CATGACCGGC
ACCGCTGACG CCGTCGACGC CGCCCTGAAG GCCGGTGGCG AGATCACCTA CTGGAGCTGG
ACCCCTTCGG CGCAGGCGCA GGTCGACGCC TTCATGAAGG AGTACCCGCA GGTCAAGGTG
AACTACGTCA ACGCGGGCAC CAACAAGGAC CAGTACACCA AGCTGCAGAA CGCGATCAAG
GCCGGCTCGG GCGCGCCCGA CGTGGCCCAG GTCGAGTACC AGGCCCTGCC GCAGTTCGCG
ATGACCGACT CGCTGCTGGA CCTCGGCCAG TTCGGGTTCA ACGAGTACGA GAAGGACTAC
ACCGCCTCCA CCTGGAACTC GGTGAAGGTC GGCGGCGGCC TGTTCGGCCT GCCGCAGGAC
TCGGGCCCCA TGGCGATGTT CTACAACAAG GAGGTGTTCG ACCAGTACCA GATCCAGGTC
CCCAAGACCT GGGACGAGTA CGTCGCCGCC GCCGAGAAGC TGAACGCCGC GGACCCCACC
AAGTTCATCA CCGCGGACTC CGGTGACGCC GGCTTCGCCA CCAGCATGAT CTGGCAGGCG
GGCGGCAAGC CGTTCACCGT CGACGGCACC AACGTCAAGG TGAACCTGCA GGACGAGGGC
GCCAAGAAGT GGACCGAGAC CTGGAACAAG CTGGTCTCCA AGAAGCTCAC CGCGCCCACC
ATCACCGGCT GGTCGGACGA GTGGTACCGG GGCCTGGGCA ACGGCAGCAT CGTCACGATG
ATCAACGGCG CCTGGATGCC CGGCATCCTC GAGGCCTCCG TGCCTGACGG CAAGGGCAAG
TGGGCCGTGG CCCCGATGCC GACCTACGAC GGCAAGCCCG CGACCGCCGA GAACGGCGGC
GGCGGCCAGT CCGTCATCAA GCAGAGCGCC AACCCCGCGC TCGCGGCGGG CTTCGTGCGC
TGGCTGAACC ACGAGCAGGG CGGCATCGAC AAGTTCATCG AGTTCGGCGG CTTCCCGGCC
ACCACCAAGG AGCTCGAGTC GGACGCGTTC CTGAACGCCG AGTCCGCGTA CTTCGGCGGC
CAGAAGATCA ACCAGGTCCT CTCGCAGGCG GGCAAGGACG TCGTGAAGGG CTGGGAGTAC
CTGCCGTTCC AGCTGTACGC CAACAGCATC TTCAACGACA ACGCCGGTAG CGCCTACGCC
AACGCCAGCG ACCTGAACGC GGGTCTGGCC TCCTGGCAGA AGGCCATCAC CGAGTACGGC
AACCAGCAGG GCTTCACCGT CACCAACTGA
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| Protein sequence | MSTTSRRARV AVAMAAALTT ALTACSSGDT AANQPAGMTG TADAVDAALK AGGEITYWSW
TPSAQAQVDA FMKEYPQVKV NYVNAGTNKD QYTKLQNAIK AGSGAPDVAQ VEYQALPQFA
MTDSLLDLGQ FGFNEYEKDY TASTWNSVKV GGGLFGLPQD SGPMAMFYNK EVFDQYQIQV
PKTWDEYVAA AEKLNAADPT KFITADSGDA GFATSMIWQA GGKPFTVDGT NVKVNLQDEG
AKKWTETWNK LVSKKLTAPT ITGWSDEWYR GLGNGSIVTM INGAWMPGIL EASVPDGKGK
WAVAPMPTYD GKPATAENGG GGQSVIKQSA NPALAAGFVR WLNHEQGGID KFIEFGGFPA
TTKELESDAF LNAESAYFGG QKINQVLSQA GKDVVKGWEY LPFQLYANSI FNDNAGSAYA
NASDLNAGLA SWQKAITEYG NQQGFTVTN
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