| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2556 |
|---|
| Symbol | |
|---|
| ID | 8326745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2884677 |
|---|
| End bp | 2885825 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943098 |
|---|
| Product | Ricin B lectin |
|---|
| Protein accession | YP_003100339 |
|---|
| Protein GI | 256376679 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.676304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCGG CGGCACTGGT GGGCACGGGC GCGGCGGCGG GCCCGGCGCA CGCGCAGGAC
GCCGGTGAGA TCGCGGGCAC GGTCTGGGTC GACAAGGACC AGGACCGCCA GCCCGGCGAG
CACGAGGCGC GCCGCGCGGG CGTGACCGTG ACAGCGCTCC AGCGCGCCAC CGGGGAGCGC
AGGACCACCA GGACCGACGA GCGCGGCGAC TTCCGCTTCA CCGGACTGCC GCTGGGCGCC
TACCAGGTCG AGGCCGACCG CACCGGGTAC GCGGCGCTCG CCGACCGGAC CTGGGACGTC
GAGCTGACCT CGGGCTCCCC CAGGGCGGGG CAGGCGTGGT TCCCGCAGCA GGGCGGCACG
CTCGGCGGCC AGGTCAGCGT GGACGCGGAC GACGACGGCG CGCGCGACGC CACCCCCGAG
CGGGTCGCGG TGACCGTGCA CCTGTGGGGA CGCGACCTCA CCGGGGCGGA GGTCAGGGCC
AGCACGACGA CCTCCGACTA CGGCTGGTAC CACTTCGACG CGCTGGCGAC GGGCGCGTAC
CAGGTCAGGG CCGAGGTCCC GCAGGGGTAC GGGCTGGCGA GGCCGAACGC GGGCGCGGGC
TCGTCCGGCG CGCACACCGA CTTCGACCTG CTGGGCGCGG AGGCCACGAG CCTGCCGGTG
CGGTTCGCCG AGACCGGGTC GCGGTACGCG GCCGTGGACA TCGGTTTGGT GCGGGGTGGG
GGTGTTGCGC CGGAACCGGT GCTGGTCAAC GCGGCCAGCG GGTGGTGCGC GGATCAGGAA
CTGCCGGGTG GGGCGGTGAC CACGGGCGTC GCGGCGGGCG ACTGCCACGG TGGGGACAAC
CAGCGCTGGC GGGCGAGGTG GGTGGAGCCG GACGTGGCGG AGTTCGTGGA CGCGCGCACG
GGGTTCTGCC TGGACCAGGA GTTCCCAGGG GGCAGGCGGA CCAGCGGGGT GGGCGCGTAC
CGGTGCCACG GCGGGGCGAA CCAGCGCTGG CGGGTGAGCC ACGACGAGCA GGGCGGCGAG
CCGTTCACGG CGGTGAACCT GGCAACCGGG GAGTGCCTGG ACCAGGAGTA CCCGACGGGG
ACGCCGACGA CGGGCGTCGG GGCGTACCGG TGCCATGGCG GGGCGAACCA GAGCTGGGTC
GCCCGGTGA
|
|---|
| Protein sequence | MAAAALVGTG AAAGPAHAQD AGEIAGTVWV DKDQDRQPGE HEARRAGVTV TALQRATGER
RTTRTDERGD FRFTGLPLGA YQVEADRTGY AALADRTWDV ELTSGSPRAG QAWFPQQGGT
LGGQVSVDAD DDGARDATPE RVAVTVHLWG RDLTGAEVRA STTTSDYGWY HFDALATGAY
QVRAEVPQGY GLARPNAGAG SSGAHTDFDL LGAEATSLPV RFAETGSRYA AVDIGLVRGG
GVAPEPVLVN AASGWCADQE LPGGAVTTGV AAGDCHGGDN QRWRARWVEP DVAEFVDART
GFCLDQEFPG GRRTSGVGAY RCHGGANQRW RVSHDEQGGE PFTAVNLATG ECLDQEYPTG
TPTTGVGAYR CHGGANQSWV AR
|
|---|
| |