Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2523 |
Symbol | |
ID | 8326712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2839358 |
End bp | 2841013 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644943066 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003100307 |
Protein GI | 256376647 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.76417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC CCGCCACCAC GGCGGACACC CGGCACCCCC AACCGGGCGA ACCGATGAAC CACCGGCAGA TCATGGAGGC CCTCAGCGGC CTGCTGCTCG TCCTGTTCGT CGCGATGCTC AGCGGCACGG TGGTCTCCAC CGCCCTGCCG CAGATCATCG GCGCTCTGGA GGGGACGCAG ACCCAGTACA CCTGGGTCGT CACCGCGACC CTGCTGACCG CCACCGCGAG CACCCCGATC TGGGGCAAGC TGGCGGACCT GTTCAACAAG AAGACGCTCG TCCAGTCGGC GATCGTGCTG TTCATCATCG GTTCGGTGAT CAGCGGTTTC GCGCAGAGCG CCGGTCAGCT GATCGCCGCC CGCGCGTTCC AGGGCATCGG CGTCGGCGGC CTGCAGGCGC TGGTGCAGGT GGTCATCGCC GCGATGATCC CGCCCCGCGA GCGCGGCCGG TACAACGGCT ACCTGGGCGG CGTGATGGCG CTGGCCACGG TCGGCGGGCC GCTGCTCGGC GGGCTGATCG TGGACACCTC GTGGCTGGGC TGGCGCTGGT GCTTCTTCGT CGGCGTCCCG GTCGCCGTGG TGGCGCTGCT GGTGCTCCAG GCGACGCTGA AGGTGCAGAC CGCGCGCCGG GAGAACGTCA AGATCGACTA CCTGGGCGCC GGCCTGATCG CGGCGGGCGT GAGCGTGCTG CTGATCTGGA TCTCGTTCGT GGACAGCTCG TTCGACTGGA TCTCCTGGCA GAGCGGCGCG ATGGTCGGCG GCTCGGTCCT GCTCCTGGGC CTGGCGGTGC TGGTCGAGCA CAAGGCGTCC GAGCCGGTGG TCCCGCCGAA GATCGTGAAG GACCGCACGA CGGCGCTCGC GATCCTGGCG AGCCTCGCGG TGGGCATGGC GATGTTCGGC GGCGCGGTGT TCCTCGGCCA GTACTTCCAG ATCGGCCGGG GCTACTCCCC CACCGAGGCC GGACTGCTGA CCATCCCGAT GATGGCGGGC GTGCTGGGCG CGTCGATCAT CTCCGGGCGC ATGATCACCC GCAGCGGCAA CGTGAAGCCG TACATCGTCA CCGGCGCCGT GGTGCTGGTC ATCGGGTTCC TGGCGCTGGG CACGATCGAC CACCAGACCT CGCTGGTGCT GGTCGGCGCG GCGATGCTGC TGGTCGGCAC GGGCGTCGGC ATGTCGATGC AGAACCTGGT GCTGGCGGTG CAGAACACCG TGCAGCTCAA GGACATCGGC GCGGCCAGCT CCACGATCGC GTTCTTCCGC TCGCTCGGCG GCACGATCGG CGTGTCGGTG CTGGGCGCGG TGCTGGCCAG GCAGGTCAGC GAGCAGATCA CCCGCGACCT GACCGCGGCG GGCGTGCCCG CGTCGGCGTC GGGCAGCGCC GGGGGCAGCC TGAACATCTC GGCGCTGCCG GGCCCGATCC AGGAGATCGT GCGCGCGGCG TACGGGGACG CGACCGGGCA CATCTTCCTG ATCGCGGCGG CGATCGGCGT GGTGGGCGTG ATCGCGGCGG CGATGCTGAA GCCCGCGAAG CTGCGCTCCA GCCTGGACCT GGGCGAGACC ACGAAGGCCG TGGCGCCGGA GGCGGCGCCG CAGGGCAAGG CCGTGACCGG CGGTGACGTG GTCGGCGGCG AGTCGCTGAC GAAGTCGCGG CGGTAA
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Protein sequence | MSAPATTADT RHPQPGEPMN HRQIMEALSG LLLVLFVAML SGTVVSTALP QIIGALEGTQ TQYTWVVTAT LLTATASTPI WGKLADLFNK KTLVQSAIVL FIIGSVISGF AQSAGQLIAA RAFQGIGVGG LQALVQVVIA AMIPPRERGR YNGYLGGVMA LATVGGPLLG GLIVDTSWLG WRWCFFVGVP VAVVALLVLQ ATLKVQTARR ENVKIDYLGA GLIAAGVSVL LIWISFVDSS FDWISWQSGA MVGGSVLLLG LAVLVEHKAS EPVVPPKIVK DRTTALAILA SLAVGMAMFG GAVFLGQYFQ IGRGYSPTEA GLLTIPMMAG VLGASIISGR MITRSGNVKP YIVTGAVVLV IGFLALGTID HQTSLVLVGA AMLLVGTGVG MSMQNLVLAV QNTVQLKDIG AASSTIAFFR SLGGTIGVSV LGAVLARQVS EQITRDLTAA GVPASASGSA GGSLNISALP GPIQEIVRAA YGDATGHIFL IAAAIGVVGV IAAAMLKPAK LRSSLDLGET TKAVAPEAAP QGKAVTGGDV VGGESLTKSR R
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