Gene Amir_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2443 
Symbol 
ID8326632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2713910 
End bp2714599 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content74% 
IMG OID644942988 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100229 
Protein GI256376569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0220439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTCCC AGTTGCCCAC CGCTCAGGCG CACGTGGACG AGGCGCCCGC AGCGCTGGCG 
CCCGCGGAGC AGGCGCCCGC GGAGCGGTTG CGGGCCGACG CGCGGGACAA CCGCGACCGC 
ATCCTGGTCA CCGCCCGCGA GGTGTTCGCG AGCCGTGGCC TGGACGCTCC GATGACCACG 
ATCGCGCGGC GCGCGGGGGT CGGCGTCGCG ACGCTGTACC GGCGGTTCCC GACCAAGGGC 
GCGCTGGTGT CGGCGGCGTT CGCGGACACG CTCTGCGAGT GCGTCGAGCT GGTGGATCAC 
GCGTTGGAGC TACCCGATCC GTGGGACGGG TTCTGCTGGC TGCTGGAGCA GGTGTGCCTG 
AAGCAGGCCG AGGACCGGGG GTTCACGGCC GCGTTCCTGC GGATGTTCCC GGACGCCGTG 
GACGACGTGG CGCGGGACCG GGCGCTGGAG CGGTTCGCCG GGCTGGTCGA GCGGGCGAAG 
GCGGGCGGCA GGCTGCGGGC GGACTTCGAG CTGCACGACC TGACGATGGC GCTGATGGCC 
AACAGCGGTC TGGTGACCGA CAGCCGGGAG GCTGCCGAGG CGGCGACGCG GCGGCTGGTG 
GGCTACCTGA TCCAGGGGTT CGCGGCGCGC GATCCGCTGC CGCCCGCGAC GCCGCTGGGG 
TTGGAGCACG TGGTGCACTA CGGGAAGTGA
 
Protein sequence
MDSQLPTAQA HVDEAPAALA PAEQAPAERL RADARDNRDR ILVTAREVFA SRGLDAPMTT 
IARRAGVGVA TLYRRFPTKG ALVSAAFADT LCECVELVDH ALELPDPWDG FCWLLEQVCL 
KQAEDRGFTA AFLRMFPDAV DDVARDRALE RFAGLVERAK AGGRLRADFE LHDLTMALMA 
NSGLVTDSRE AAEAATRRLV GYLIQGFAAR DPLPPATPLG LEHVVHYGK