Gene Amir_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2408 
Symbol 
ID8326597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2666955 
End bp2667653 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID644942953 
ProductABC transporter related 
Protein accessionYP_003100194 
Protein GI256376534 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000799647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGG TTGAGGGGTT GTGCAAGCGG CGCGGCGGGC GGTTCGTCGT GCGGGAGCTC 
GGGTTTCGGG TTGGGGCTGG GCGGGTGACC GCCTTCCTGG GGCCCAACGG GGCCGGGAAG
TCGACGACGT TGCGGGTGCT GCTCGGGTTG GACCGGGCGG ATTCGGGGCG GGCGTTGGTG
CGCGGGGTGC CCTATGCGCG GTTGCGGTGG CCGTTGCGGG TGGTCGGGGC GGTGCTGGAG
GACGGGGCGC ACCCGGCTCG CAGCGGGCGC GGGCACCTGG GGTGGGTGGC GCGCAGCAAC
GGGATCGCGC TGTCGCGGGT TTCGGAAGTG CTTGGGGTGG CTGGGCTTTC CGACTTCGGC
GGGGTTCGGG TTGGGGCTTA CTCGTTGGGG ATGCGGCGGC GGTTGGCCGT TGCCTGCGCG
CTGTTGGGTG AGCCCGAGGT GCTGGTGCTG GACGAGCCGC TGAACGGGCT CGATCCCGAG
GGGATCAGGT GGTTGCGGCG GGTGGTGCGG GAGTTCGCCG ACTCGGGTGG GGCGGTGCTG
TTGTCCAGCC ACCTGGTCGC GGAGGCCGAG GCTGTGGCGG ATGACGTCGT GGTGGTGGAC
CGGGGGCGGT TGGTCGCCTC CGGGACGGTC GCGGAGGTCG TGGGGGCGCG GGGGAGCTTG
GAAGAGGCGT TCTTCGCGCT GACCGGGGGT GCGGCGTGA
 
Protein sequence
MIEVEGLCKR RGGRFVVREL GFRVGAGRVT AFLGPNGAGK STTLRVLLGL DRADSGRALV 
RGVPYARLRW PLRVVGAVLE DGAHPARSGR GHLGWVARSN GIALSRVSEV LGVAGLSDFG
GVRVGAYSLG MRRRLAVACA LLGEPEVLVL DEPLNGLDPE GIRWLRRVVR EFADSGGAVL
LSSHLVAEAE AVADDVVVVD RGRLVASGTV AEVVGARGSL EEAFFALTGG AA