| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2377 |
|---|
| Symbol | |
|---|
| ID | 8326566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2637971 |
|---|
| End bp | 2638822 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644942922 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003100163 |
|---|
| Protein GI | 256376503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000201287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGAGA CTGGGGCGGT GACGGGATCT TCGGCGGGGA ACGCGCTGGG CGAGGCGCTG
CGCGGGTGGC GGGACCGGCT CTCGCCGCTG GACGTGGGGC TGCCGGTCTT CGGGTCGCGG
CGGGCCAGCG GGCTGCGGCG GGAGGAGCTG TCGGCGCTGG CCGGGCTGAG CGTGGACTAC
CTGGTGCGGC TGGAGCAGGG GCGGGCGCGG AACCCGTCGG AGCAGGTCGT GGCGGCGCTG
GCGCGGGCGC TGCAGCTGAC GGCGGCGGAG CGGGACCACC TGCACCGGTT GGCGCACCTG
CCGCCGCCGT CGAGCGGGGT GATCGACAGC CACGTGCCGC CGAGCGTGCA GCGGCTGGTG
GCGCGGCTCG GGGAGCTGCC GGTGGCGGTG TTCAGCGCGG ACTGGACGCT GGTGACGTGG
TCGCCGCTGT GGGCGGCGCT GCTGGGGGAC CCGCTGGGGC TGCCCGCGGC GGAGCGGAAC
ATCGTGGCGG CGGCGTTCCT GGGGTCGCTG CCGGTGCGGC GGGGGTCGTT GACGTTGGAG
CCCGCGCTGG TGGCGGACCT GCGGGCGGCG ACGGTGCGGT ACCCGGCGGA CCGGGGGCTG
GCCGAGCTGG TGCGGCGATG CCTGGCGGGG AGCGAGCGGT TCGCGGAGCT GTGGCGGGCG
GGGGCGGTGG GCGAGCACAC GCACGACCGG AAGGTGGTGG CGCACCCGGC GGTGGGCGAG
GTGGTGCTGG ACTGCGACGT GCTCACGGTG CCGGGGGCGG ACCTGAAGAT CGTGGTGTAC
AGCGCGGCGG CCGGGAGCGC GGACGCGGAG AAGTTGGACT TCCTGCGGGT CACCGGGATC
GCGGTCGGGT AG
|
|---|
| Protein sequence | MGETGAVTGS SAGNALGEAL RGWRDRLSPL DVGLPVFGSR RASGLRREEL SALAGLSVDY
LVRLEQGRAR NPSEQVVAAL ARALQLTAAE RDHLHRLAHL PPPSSGVIDS HVPPSVQRLV
ARLGELPVAV FSADWTLVTW SPLWAALLGD PLGLPAAERN IVAAAFLGSL PVRRGSLTLE
PALVADLRAA TVRYPADRGL AELVRRCLAG SERFAELWRA GAVGEHTHDR KVVAHPAVGE
VVLDCDVLTV PGADLKIVVY SAAAGSADAE KLDFLRVTGI AVG
|
|---|
| |