| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2343 |
|---|
| Symbol | |
|---|
| ID | 8326532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2600571 |
|---|
| End bp | 2600999 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644942888 |
|---|
| Product | TolA family protein |
|---|
| Protein accession | YP_003100129 |
|---|
| Protein GI | 256376469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGG GATCGAGGTT GGCGGCCGTG CTGCGCGCCA GGCGCGCGCA GGAGGACATG
GCGCGCGGCG ACGTGGCCAA GGCGAACGCG GAGGTCGCGC GGGCGAGCGC GGGCGTGACG
CGGCGCGAGG AGCAGCTGGA CGGCTGGAGC GGCCCCGAGG GCGGTGACCC GACCGCGTAC
CTCGCGTCGG TCGCCGCGGG CCGGGCCATG GCGCAGGCGC TGGGCGCCGC CGAGCAGGTG
CGGCGCGAGG CCGAGGACGC CGCGACGGGC AGGCAGGACG TGCTGCGCGA GGCGGCGACG
CGGCGGCGGA CGGTGGAGAA GTTGACGGAG CGCGCGGCCG ACCAGGCCCG CAAGGACGAG
CTGGCGGCGG CCCAGCGGGT CGTGGACGAC CTGTGGGGCG GGCGCACCAC CGGGGGTGGC
CAGGAGTGA
|
|---|
| Protein sequence | MSVGSRLAAV LRARRAQEDM ARGDVAKANA EVARASAGVT RREEQLDGWS GPEGGDPTAY
LASVAAGRAM AQALGAAEQV RREAEDAATG RQDVLREAAT RRRTVEKLTE RAADQARKDE
LAAAQRVVDD LWGGRTTGGG QE
|
|---|
| |