Gene Amir_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2282 
Symbol 
ID8326471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2539016 
End bp2539726 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content79% 
IMG OID644942827 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003100068 
Protein GI256376408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCG CTGGACTGGC TTCGGTCGGC TTCCCGGACA GACCGCTCGC GGAGGTCGTG 
GAGCTGGCGC TGGGCGCGAG GGCGGGCGCC GTCGCCTGGG GCGGCGACGT GCACGTCCCG 
GCGGGCGACC TGGTGGCGGC CGAGCGCGCG GCGGCGCTGA GCGAGGCGGC CGGGCTCGTC 
GTGGGGGTCT ACGGGTCCGG GTACCGGGCC GGGTGCGACG ACCCTGAGGA GTTCGCGGCC 
GTGCTGGACA GCGCGCAGTC CCTCGGCGCG CCTGGCGTGC TGGTGCGGGC CGGGGGCGTG 
GCCCCGTGGG AGGCGACGGT CGGGGCGTGG TCGTTCGTGG TGGCGGAGCT GCGCCGCTGC 
GTCCGGCTCG CGGCCGAGCG GGACCTGGTC GTGGTGGCCG AGCACAGCGC GACGAGCCTG 
TTCGGCACCC TGGAGTCCGC GCTGCGGCTC CTGGCGGCGG TGCCGGGGCT CGCGGCGCAC 
TGGCGCGCGC TGGGCGGGTC GGGGGCGGTG CTGGCGGAGG TGTCGGCGCT GCTGCCGTCG 
CTGGTGGTGC TCTCCTGCGG GGCGGGCGAT CCGGGCGCCT CGGCGGCGCT GGAGCTGCTC 
GCGCGGGACG GCGGCGCGCG GATGGCGCTG CTGGAACCGG CCTCCGGCGA CGCGACGGCC 
GTCGTGCGGG ACGGGCGGGC GCTGCTCGCC CTGCTGGAGC GGCGTTCCTG A
 
Protein sequence
MITAGLASVG FPDRPLAEVV ELALGARAGA VAWGGDVHVP AGDLVAAERA AALSEAAGLV 
VGVYGSGYRA GCDDPEEFAA VLDSAQSLGA PGVLVRAGGV APWEATVGAW SFVVAELRRC 
VRLAAERDLV VVAEHSATSL FGTLESALRL LAAVPGLAAH WRALGGSGAV LAEVSALLPS 
LVVLSCGAGD PGASAALELL ARDGGARMAL LEPASGDATA VVRDGRALLA LLERRS