Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2141 |
Symbol | |
ID | 8326330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2366708 |
End bp | 2367310 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644942691 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003099932 |
Protein GI | 256376272 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000550599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACG ACGAGCTGCT CGTCATCCGC TGCAAGCTCG GTGAGCGGGA GGCGTGCGCC GAACTGGTGC GGGCTTGGCA CCCGGTCGTG GAGCGGTATG TCGCGCGGAT GTTGGGGCGT GGTGATGACG ACGCGGTGCA GGAGGTCTGG ATCGGGGTGT TCACCGGGTT GCCGAGGTTG CGCGACACGG GGCGGTTCAG GGCTTGGCTG TACACGATCG CCCGGCGGGC TGTGGTGAAC CGGTTGCGGG GGGTTTACCG GGAGGCGCGG GTTGAGCTTT TGGGGTCTTC CGGTGGGTCT GGTGGTCCGG GGGGTTCTGG TGGGTCTGGT TGGTCCGGTG GGTCTGGTGG CTCTGGTGGT TCCGGTGAAC GGCCCATCGA TCCGGTGGCC GATCTGGTGC TGGACCGCGA GGCGGTCGCG GCGGGGTTGG CCGACCTGCC GCCGCTGGAA CGCGAGGTGA TCGTGCTGTT CCACCTGGAG GACCTGGCGC TGGAGACCTG CGCGCAGGTG TGCGGAGTGC CGGTGGGAAC CGTCAAGTCC CGGCTCAACC GGGCACGCGG CCTGCTGCGG GCGGCGTTGG AGCGGAAGGG GTATCCGGCG TGA
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Protein sequence | MDDDELLVIR CKLGEREACA ELVRAWHPVV ERYVARMLGR GDDDAVQEVW IGVFTGLPRL RDTGRFRAWL YTIARRAVVN RLRGVYREAR VELLGSSGGS GGPGGSGGSG WSGGSGGSGG SGERPIDPVA DLVLDREAVA AGLADLPPLE REVIVLFHLE DLALETCAQV CGVPVGTVKS RLNRARGLLR AALERKGYPA
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