| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2016 |
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| Symbol | |
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| ID | 8326204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2235175 |
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| End bp | 2235852 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644942568 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003099810 |
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| Protein GI | 256376150 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGACG TGAGGACCTC TCTGGTGGCT TACCCGCCCG CACCGCCGCC GCGCCCAGAC
CCCCCGACAC CTGCCGCGAC GGGCGGGCGG GCGTTCGACG CCGCCCTCGT CGCGCGGGTG
GTCGAGGGCG ACCGGACCGC GTTCGGACAT CTGTACGACC GCTACGGTCG TCCGGCTTAC
TCGTTGGCCA GGAGGATCTG CGTCGACCCC GACCTCGCCG AGGACGTGGT GCAGGAGGCC
TTCCTGGTGC TGTGGCGCAG TCCACAAGGG TACGACAGCG CCAAGGGCGC GTTCGGGACG
TGGCTGATGA CCGTGGTGCA CCACCGCGCG GTCGACGCCG TCCGCAGGGA GAACACCCGC
AGGGTCAGAT CGGTGCCGCT CACCGACGAG GTGTCCGAGC GCGCCGTGCC GCCCGCCGAG
GGCGCGGACG GCGCCGCGCT GGCCGGGCTG GTGGGCGCGG AGGTGCGGGC CGCGTTGGGC
AGACTGCCCG AGGACCAGCG GCAGGTGCTG TCGCTGGCGT ACCTGGGCGG GTACACGCAG
GCCGAGGTGG CGGCGCTGAC CGGGGTGCCG CTGGGCACGG TCAAGTCGCG CACGTTCGCG
GCCGTGCGGC GGCTGCGCGG GTTGCTGCGG TCCGTGTGGA CCGGGGAGAA CGACGAGGCG
ACGGAGGCGC GGCGGTGA
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| Protein sequence | MLDVRTSLVA YPPAPPPRPD PPTPAATGGR AFDAALVARV VEGDRTAFGH LYDRYGRPAY
SLARRICVDP DLAEDVVQEA FLVLWRSPQG YDSAKGAFGT WLMTVVHHRA VDAVRRENTR
RVRSVPLTDE VSERAVPPAE GADGAALAGL VGAEVRAALG RLPEDQRQVL SLAYLGGYTQ
AEVAALTGVP LGTVKSRTFA AVRRLRGLLR SVWTGENDEA TEARR
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