Gene Amir_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1998 
Symbol 
ID8326183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2213059 
End bp2213967 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content73% 
IMG OID644942547 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003099792 
Protein GI256376132 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000898814 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGTGGG AACGGGGGTA CGTGATGAGG GTGCTGGTCA TCGGGAGCGG GTACCTGGGT 
GGTGCGGTCG CTGGGCGGCT GCGGGCTGGT GGTGTTGACG CTGTGGTGTG CTCTCGGCGG
CGGCCGGGGG CGGCTTCTGC TGGTGGGGCG CCTTGGCGGG AGTTGGACGT TCGGGATGGG
AGGGCCTGTC GGGAGCTTGT TGCGGAGCTC GCGCCCGAGG GGGTTGTGGT GGTGCACGGG
CCATCCGACA TCACCTGGTG CGAGGCGAAT CCCGAGCTCG CCCGTGAGGC TCATGCCGGT
GGGGCTCGGA ACATCGCTGA CGCCGTTGAG GGGCGGCACG TGGTGTTGAT ATCCACCGAC
AACGTGTTCG ACGGGACTCG GGCCAGCAGC GGGGAGTCCG ACCCGGTCTC GCCCGCGAAC
GCCTACGGCG CGGCGAAGCT CGCCGCTGAG CGGACGTTCC TGGAGCGGGG CAGCGCGTTG
GCGCTCCGGG TCAGCCTGGT GCACGGGTGG GACCCGGACG GGTTGCGGCC GAACTTCGCC
ACCACCTGCG TGCGGGCCCT GCGGGACGGG CGGGAGCTGG ACGTGCCCGA GGACCACTGG
AACACGCCCG TGCACGTGGA CGACGTGTCG GCCTGGGTGG TGGCGTTGAT GGGGGCCCGG
CGCACCGGAG TGCTGCACCT CGGGGGGCCC GATCGGCTCA GCCGGCTGGA GTGGGCGCGG
CGGATCGCCG ACGCGCAGGG GTTGGACGCG GGGTTGTTGC GGCCGGTGCG TCGTGCGGAC
AGCGCGTACG CCTGCCGTCC CGAGAACGCC TGCCTGCACA GCGAGCGCGC GGCGCTGCTG
CCCGAGCTGG CCGGGTTGGC ACCGGAAGGG GTGGACGTGA GCGCGCGCCG GTTGCCCCAG
GAGGGCTGA
 
Protein sequence
MGWERGYVMR VLVIGSGYLG GAVAGRLRAG GVDAVVCSRR RPGAASAGGA PWRELDVRDG 
RACRELVAEL APEGVVVVHG PSDITWCEAN PELAREAHAG GARNIADAVE GRHVVLISTD
NVFDGTRASS GESDPVSPAN AYGAAKLAAE RTFLERGSAL ALRVSLVHGW DPDGLRPNFA
TTCVRALRDG RELDVPEDHW NTPVHVDDVS AWVVALMGAR RTGVLHLGGP DRLSRLEWAR
RIADAQGLDA GLLRPVRRAD SAYACRPENA CLHSERAALL PELAGLAPEG VDVSARRLPQ
EG