Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1998 |
Symbol | |
ID | 8326183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2213059 |
End bp | 2213967 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942547 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_003099792 |
Protein GI | 256376132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000898814 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGTGGG AACGGGGGTA CGTGATGAGG GTGCTGGTCA TCGGGAGCGG GTACCTGGGT GGTGCGGTCG CTGGGCGGCT GCGGGCTGGT GGTGTTGACG CTGTGGTGTG CTCTCGGCGG CGGCCGGGGG CGGCTTCTGC TGGTGGGGCG CCTTGGCGGG AGTTGGACGT TCGGGATGGG AGGGCCTGTC GGGAGCTTGT TGCGGAGCTC GCGCCCGAGG GGGTTGTGGT GGTGCACGGG CCATCCGACA TCACCTGGTG CGAGGCGAAT CCCGAGCTCG CCCGTGAGGC TCATGCCGGT GGGGCTCGGA ACATCGCTGA CGCCGTTGAG GGGCGGCACG TGGTGTTGAT ATCCACCGAC AACGTGTTCG ACGGGACTCG GGCCAGCAGC GGGGAGTCCG ACCCGGTCTC GCCCGCGAAC GCCTACGGCG CGGCGAAGCT CGCCGCTGAG CGGACGTTCC TGGAGCGGGG CAGCGCGTTG GCGCTCCGGG TCAGCCTGGT GCACGGGTGG GACCCGGACG GGTTGCGGCC GAACTTCGCC ACCACCTGCG TGCGGGCCCT GCGGGACGGG CGGGAGCTGG ACGTGCCCGA GGACCACTGG AACACGCCCG TGCACGTGGA CGACGTGTCG GCCTGGGTGG TGGCGTTGAT GGGGGCCCGG CGCACCGGAG TGCTGCACCT CGGGGGGCCC GATCGGCTCA GCCGGCTGGA GTGGGCGCGG CGGATCGCCG ACGCGCAGGG GTTGGACGCG GGGTTGTTGC GGCCGGTGCG TCGTGCGGAC AGCGCGTACG CCTGCCGTCC CGAGAACGCC TGCCTGCACA GCGAGCGCGC GGCGCTGCTG CCCGAGCTGG CCGGGTTGGC ACCGGAAGGG GTGGACGTGA GCGCGCGCCG GTTGCCCCAG GAGGGCTGA
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Protein sequence | MGWERGYVMR VLVIGSGYLG GAVAGRLRAG GVDAVVCSRR RPGAASAGGA PWRELDVRDG RACRELVAEL APEGVVVVHG PSDITWCEAN PELAREAHAG GARNIADAVE GRHVVLISTD NVFDGTRASS GESDPVSPAN AYGAAKLAAE RTFLERGSAL ALRVSLVHGW DPDGLRPNFA TTCVRALRDG RELDVPEDHW NTPVHVDDVS AWVVALMGAR RTGVLHLGGP DRLSRLEWAR RIADAQGLDA GLLRPVRRAD SAYACRPENA CLHSERAALL PELAGLAPEG VDVSARRLPQ EG
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