Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1959 |
Symbol | |
ID | 8326144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2169772 |
End bp | 2170413 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644942508 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003099753 |
Protein GI | 256376093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0909176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGCGC GCGCGGACGG CGGGGCGGCG AGCGCGGTGC GCCCGAGGCG GGCCGACGCC CGGCGCAACC ACGACCGGAT CGCGCGTGCG GCCGTGGAGG CGTTCGGCCG CCGGGGGCCC GAGGGGCCGA GGCTGGAGGA CGTGGCGGCG CTGGCCGGGG TCGGCGTGGC GACGGTGTAC CGCCTGTTCG GCGACCGGGA CGGGGTGCTG CGGGCGGCGT TCGAGCTGTT CTTCGCGGAG CGGGTGACGC CGCTGGTGCT GGAGGCGAGG GCGGGGTCCG ACCCCGGCGC CGGGTTGCGG CTGGTGGTGG CGGGGGCGGT GGAGGCGTTC GCGGACCACC GCTCGCTGGT GGTCGCGGCG AAGCACGCGG CCCTGATCGA GCCGGAGACC CTGGACCGCC TGCTCGGCGA GATGGCGGAC CTGCTGCTGG AGGCGCAGCG GCTCGGCCAG GTGCGCGACG ACGTGGTGGT GGGCGACCTC GGCGGGCTGC TGATGATGGC GCTGGCGGTC TCCCAGCTGC CGGACCGGCT CCGGAACCTG GCCCTGCTGT GGGACGGCCT GCGCCCCGGC GGTTCGGCCC TGCCCACCCC CGAGGGCTGC CGACACCCGA GTGCCGCCGA CGGCGGGGTC CCCCCGGCCT AG
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Protein sequence | MVARADGGAA SAVRPRRADA RRNHDRIARA AVEAFGRRGP EGPRLEDVAA LAGVGVATVY RLFGDRDGVL RAAFELFFAE RVTPLVLEAR AGSDPGAGLR LVVAGAVEAF ADHRSLVVAA KHAALIEPET LDRLLGEMAD LLLEAQRLGQ VRDDVVVGDL GGLLMMALAV SQLPDRLRNL ALLWDGLRPG GSALPTPEGC RHPSAADGGV PPA
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