Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1944 |
Symbol | |
ID | 8326129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2153728 |
End bp | 2154567 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644942493 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003099738 |
Protein GI | 256376078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCCCA CCGTGCGCAG CCGCCGCCTG GGTGCCCGCC TGGGCGACCA CCGGCAGCAG AACAACCTGT CCGGCACCGA ACTGGCCGCG CGGCTCGGCG TGCACCAGGC CACCTGGTCG AAGATCGAGA CCGGGAAGAC GAAGGTCTCC CCCGCCCTGC TGGCCCGCAC GGCGGAGATC CTCGACATCC CGGCCGACGC GATCGCCCAG CTCCAGGAAC TGCACCGCAG GGCCGACGAG CCCGGCTGGT GGCAGGACTA CGGCGACATC CTGTCCGAGG CCGTGCAGAT GCTGATCGAG CTGGAGGCCG ACGCGTCCTG GATCCGCACC TACGAGGGCC AGGTCATCCC CGGACTGCTC CAGACCCGCG AGTACGCCGA GCGCGTCATC ACGGCGGTCT CGCCGCACAT CCGGGTCTCG GACATCGACC GCTACCTGGA GCTGCGGATG AAGCGCCAGA AGCAGCTCAG CGAGGACCTG CGCCTGACCG CCGTGGTCAG CGAGGCCGCC ATCCGCCAGC AGGTCGGCGG TCCCACCGTC CTGCGCGCGC AGCTCCAGCA CATCGCCCGA ACGGTCCGGG AGCACGACGT CACGGTGCAG GTCGTCCCGT TCACGGCGGA CGCCCACGCC GCGCTCGGCG ACTCGTTCGT GATCATCCAG TGGCCCGACG AAGCCGATCC CGAGGCCGTC TACGCTGACG GTGTGACCTC CTGGACGGTG CACGAGCGCA GCGGGATCAT CCGCAGCTAC CTGCACGCGT TCAGCTCGGT GCAGGGCCAG GCCCTGTCAC CCAGGGAGTC ACTCGACCTC ATCAACGACG TGATCAAGGA ACTGGGATGA
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Protein sequence | MRPTVRSRRL GARLGDHRQQ NNLSGTELAA RLGVHQATWS KIETGKTKVS PALLARTAEI LDIPADAIAQ LQELHRRADE PGWWQDYGDI LSEAVQMLIE LEADASWIRT YEGQVIPGLL QTREYAERVI TAVSPHIRVS DIDRYLELRM KRQKQLSEDL RLTAVVSEAA IRQQVGGPTV LRAQLQHIAR TVREHDVTVQ VVPFTADAHA ALGDSFVIIQ WPDEADPEAV YADGVTSWTV HERSGIIRSY LHAFSSVQGQ ALSPRESLDL INDVIKELG
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