Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1940 |
Symbol | |
ID | 8326125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2151683 |
End bp | 2152603 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644942489 |
Product | ABC transporter related |
Protein accession | YP_003099734 |
Protein GI | 256376074 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA CAACTGCTCC GGCGGCGGTC TCGCTGCGCG GGGTGCGCAA GTCACGCGGA GCCGTCAGGG CGGTGGACGG GGTCGACCTC GTCGTCGCGC CCGGCGAGGT GGTGGCGCTG CTCGGCCCGA ACGGCGCGGG CAAGTCCACC ACCGTGGACG TCCTGCTCGG GCTCACCGCC CCGGACGCCG GGGAGGTCCG GCTGTTCGGC CGCACGCCCA GGCAGGCCGT CGTGGACGGC CTGGTCGGCG CGGTGCTCCA GGACGGGGCG CTGCTGGAGG GCGCGACGGT CGGCGAGGTC GTCGGCCTGG TCGCCGCGCT GCACCGCCGC CCGCTGCCGG TCGCCGAGGC GCTGGCCCTG GCGGGCGCGA CGGACCTGGC GCGCCGCCGC TCCACCGAGC TGTCCGGCGG CCAGCGCAAG CGCGCCCTGC TCGCCACCGC CCTCGTGCCC GACCCTGACC TGCTGGTCCT GGACGAGCCC ACCGCGGCCC TGGACGTCCA GTCCCGCCGC CGCTTCTGGG CCACCACGCG CGAGCACACC GCGCGCGGCC GGACCGTCCT GTTCGCCACC CACCACCTGG AGGAGGCGCA GGAGTTCGCC GACCGGGTCG TGCTGCTCGA CGGCGGGAAG GTCATCGCGG ACGGCACCGT CGCGCAGATC CGGACCGCCG TGTCCGGCCG CGTCATCGCC GCCACGCTCC CCGGAGCGTC GGCCCCCGGC GCCGATCTCG CCCCGCTGCG CGCGCTGCCC GGCGTGCGCG CGGTCGAGAC CCGCGGCGAC CGGGTCCTGC TGGAGTGCGC CGACTCGGAC GCCGCGCTGC GCGCCCTGCT CGCCACCCAC CCCACCACCC ACGACGTCGA GGTCACCGCG CTGGGCCTGG AAGCGGCCTT CCTCGCGCTG ACCGGACGGG AGAACCGGTG A
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Protein sequence | MATTTAPAAV SLRGVRKSRG AVRAVDGVDL VVAPGEVVAL LGPNGAGKST TVDVLLGLTA PDAGEVRLFG RTPRQAVVDG LVGAVLQDGA LLEGATVGEV VGLVAALHRR PLPVAEALAL AGATDLARRR STELSGGQRK RALLATALVP DPDLLVLDEP TAALDVQSRR RFWATTREHT ARGRTVLFAT HHLEEAQEFA DRVVLLDGGK VIADGTVAQI RTAVSGRVIA ATLPGASAPG ADLAPLRALP GVRAVETRGD RVLLECADSD AALRALLATH PTTHDVEVTA LGLEAAFLAL TGRENR
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