Gene Amir_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1940 
Symbol 
ID8326125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2151683 
End bp2152603 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content77% 
IMG OID644942489 
ProductABC transporter related 
Protein accessionYP_003099734 
Protein GI256376074 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA CAACTGCTCC GGCGGCGGTC TCGCTGCGCG GGGTGCGCAA GTCACGCGGA 
GCCGTCAGGG CGGTGGACGG GGTCGACCTC GTCGTCGCGC CCGGCGAGGT GGTGGCGCTG
CTCGGCCCGA ACGGCGCGGG CAAGTCCACC ACCGTGGACG TCCTGCTCGG GCTCACCGCC
CCGGACGCCG GGGAGGTCCG GCTGTTCGGC CGCACGCCCA GGCAGGCCGT CGTGGACGGC
CTGGTCGGCG CGGTGCTCCA GGACGGGGCG CTGCTGGAGG GCGCGACGGT CGGCGAGGTC
GTCGGCCTGG TCGCCGCGCT GCACCGCCGC CCGCTGCCGG TCGCCGAGGC GCTGGCCCTG
GCGGGCGCGA CGGACCTGGC GCGCCGCCGC TCCACCGAGC TGTCCGGCGG CCAGCGCAAG
CGCGCCCTGC TCGCCACCGC CCTCGTGCCC GACCCTGACC TGCTGGTCCT GGACGAGCCC
ACCGCGGCCC TGGACGTCCA GTCCCGCCGC CGCTTCTGGG CCACCACGCG CGAGCACACC
GCGCGCGGCC GGACCGTCCT GTTCGCCACC CACCACCTGG AGGAGGCGCA GGAGTTCGCC
GACCGGGTCG TGCTGCTCGA CGGCGGGAAG GTCATCGCGG ACGGCACCGT CGCGCAGATC
CGGACCGCCG TGTCCGGCCG CGTCATCGCC GCCACGCTCC CCGGAGCGTC GGCCCCCGGC
GCCGATCTCG CCCCGCTGCG CGCGCTGCCC GGCGTGCGCG CGGTCGAGAC CCGCGGCGAC
CGGGTCCTGC TGGAGTGCGC CGACTCGGAC GCCGCGCTGC GCGCCCTGCT CGCCACCCAC
CCCACCACCC ACGACGTCGA GGTCACCGCG CTGGGCCTGG AAGCGGCCTT CCTCGCGCTG
ACCGGACGGG AGAACCGGTG A
 
Protein sequence
MATTTAPAAV SLRGVRKSRG AVRAVDGVDL VVAPGEVVAL LGPNGAGKST TVDVLLGLTA 
PDAGEVRLFG RTPRQAVVDG LVGAVLQDGA LLEGATVGEV VGLVAALHRR PLPVAEALAL
AGATDLARRR STELSGGQRK RALLATALVP DPDLLVLDEP TAALDVQSRR RFWATTREHT
ARGRTVLFAT HHLEEAQEFA DRVVLLDGGK VIADGTVAQI RTAVSGRVIA ATLPGASAPG
ADLAPLRALP GVRAVETRGD RVLLECADSD AALRALLATH PTTHDVEVTA LGLEAAFLAL
TGRENR