| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1930 |
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| Symbol | |
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| ID | 8326115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2143103 |
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| End bp | 2144605 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942479 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_003099724 |
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| Protein GI | 256376064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00284341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAGAG CAGTTGTGTC GTTCCGGACC GACGACGTGG TGGGGCCGGT GCGCAGGAGG
CTGTTCGGGT CGTTCGTGGA GCACCTGGGG AGGTGCGTGT ACGGCGGGAT CCACGAGCCG
GGGCACCCGT CGGCGGACGA GGAGGGGTTC CGGCGGGACG TGCTGGCGCT GACCCGCGAG
ATGGGGGTGT CGGTGGTCCG GTACCCCGGT GGGAACTTCG TGTCCGGGTA CCGCTGGGAG
GACGGGGTGG GGCCGCGCGG GCAGCGGCCG GTGCGGCGGG ACCTGGCGTG GCGCAGCATC
GAGTCGAACG AGGTCGGGCT GGACGAGTTC GTGCGGTGGG CCCGGAAGGC GGAGGTCGAG
GTGATGTACG CGGTCAACCT CGGGACTCGG GGGGTGGCCG AGGCGCTGGA CGTGCACGAG
TACGCGAATC ACGGTTCGGG AACGACGTTG TCGGACCTGC GGGTCGCGAA CGGGAGCGCG
GAGCCGCACG GGATCTCGTT GTGGTGCTTG GGGAACGAGA TGGACGGGCC GTGGCAGCTG
GGGCACAAGA CGGCGGAGGA GTACGGCAGG CTGGCGGCTG AGACCGCCAG GGCGCTGCGG
CAGGCGGAGC CGGGGGTGGA GTTGGTGGCG TGCGGGAGCT CCAGCTCCGC GATGCCCACC
TTCGGCGAGT GGGAGCGGGT TGTGCTGGAG GCCGCGTACG AGGAGGTCGA CCACATCTCG
TGCCACGCGT ACTACGAGGT GCTGGACGGG GACGTGGACA GTTTTCTGGC TTCTGCGGAG
GACATGGACC GGTTCATCGG GAGTGTTGCT GCCACGGCGG ACGCGGTGGG CGCGAAGGTG
AAGAGCCCGA AGCGGATCGG GATCTCGTTC GACGAGTGGA ACGTGTGGTC GATCAAGGAC
TTTGAGGCGT CGCGGACCTC GGAGTGGCGG AGTGCGCCGA AGTTGATCGA GGACACGTAC
GACGTGGCGG ACGCGGTGGT GGTGGGGAAC TTGTTGATCT CGCTGCTGCG GCACGCGGAT
CGGGTCGCGG TGGCTTGCCA GGCGCAACTG GTGAACGTGA TCGCGCCGAT TCGGTGCGAG
CCGGATTCGG CGGCTTGGAG GCAGACGACG TTTCACCCGT TCGCGTTGAC GTCGCGGTTG
GCGCGGGGGG AGGTGCTGCG GACTGTGGTG GATGGGCCTA CGCAGGACAC CGGGCGGTTC
GGGGAGGTTC CGGTGGTGGA CGCGGTGGTG ACGCGGGAGG GGGAGGAGGT TGTGGTGTTC
TTGGTCAACC GGCATCGGCA CGAGTCGGTT GAGGTTGGGT TCGAGGGTGG GGAGCGGGGG
GTTGTCGAGG CTTGGGTGTT GGGGGATGAG GACAGTGGGG CGATCAACAC TGCTTTGCAA
CCGGAGAGGG TGAAGCCGAG GGGGTTGGGG GTTGAGCGGG ATGGGACGGC GGTGCGGGTT
GTCCTGCCGC CGGTTTCGTG GGGGGTGGTT CGGATGGGGG GAGATGTGAG GGGAGAGATG
TGA
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| Protein sequence | MLRAVVSFRT DDVVGPVRRR LFGSFVEHLG RCVYGGIHEP GHPSADEEGF RRDVLALTRE
MGVSVVRYPG GNFVSGYRWE DGVGPRGQRP VRRDLAWRSI ESNEVGLDEF VRWARKAEVE
VMYAVNLGTR GVAEALDVHE YANHGSGTTL SDLRVANGSA EPHGISLWCL GNEMDGPWQL
GHKTAEEYGR LAAETARALR QAEPGVELVA CGSSSSAMPT FGEWERVVLE AAYEEVDHIS
CHAYYEVLDG DVDSFLASAE DMDRFIGSVA ATADAVGAKV KSPKRIGISF DEWNVWSIKD
FEASRTSEWR SAPKLIEDTY DVADAVVVGN LLISLLRHAD RVAVACQAQL VNVIAPIRCE
PDSAAWRQTT FHPFALTSRL ARGEVLRTVV DGPTQDTGRF GEVPVVDAVV TREGEEVVVF
LVNRHRHESV EVGFEGGERG VVEAWVLGDE DSGAINTALQ PERVKPRGLG VERDGTAVRV
VLPPVSWGVV RMGGDVRGEM
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