Gene Amir_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1885 
Symbol 
ID8326070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2085648 
End bp2086754 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID644942434 
ProductVWA containing CoxE family protein 
Protein accessionYP_003099679 
Protein GI256376019 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACG AGATGGAGCG GTGGCGGCTC GTCCTGGGCA GCGCCGCCGA CGGGTGCGCG 
GGCGGGCTGG GCGGCGACGC GCTGGACCGC GACGTCGCGC TCACCTGGCT GTACGAGCGG
GACGACGGTC TCGACGAGCG GGACGTGCGG CGCTCGGGCA GCGGCGACTC GGTGCTGCGG
GTGGTGGACT GGCTGGACGA CGTGCACCGG CTGTTCCCGC GCCGCACGGT CGAGCGGCTG
GAGCGGGACG CCGTCGAGAC CTACGGCATC ACCGAGGTCG TCACCGACCC CGGCGTGCTG
GAGCGGGTCG AGCCGAGCGT GGCGCTGCTG CGCGCGGTCA TGCGCACCAA GCACCTGATG
AACCCGGCGG TGCTCGCGAT GGCGCGGCGC ATCGTGGAGG CCGTGGTGCG GGACCTGATG
GCGCGGCTGG CCCGCGAGGT GCGGCGCTCG TTCACCGGCG CCCGCTCGCG CAGGCGGTCG
AACTTCAAGC AGGCCAGGAA CTTCGACTTC CGGGGCACGA TCCGCGCGAA CCTGGCGCAC
TACCAGCCGG AGACGCGGCG GATCTCCATC GAGGAGCCGA GGTTCACCTC CCGCACCCGC
AAGCACCTGG ACTCCTGGCA GCTGGTGCTG GTGGTGGACC AGTCCGGGTC GATGGCCGGA
TCGGTGATCC ACTCGGCGGT GACGGCGGCG TGCCTGTGGA ACCTGCCCGG CCTCAAGACG
CACCTGGTCG CCTTCGACAC CCAGGTGGTG GACCTGACCA GCGACGTCAC CGACCCGGTC
GAGCTGCTGA TGAAGGTGCA GCTGGGCGGC GGCACGGACA TCGCGAAGGC GATGACGTAC
GCGGCGGGCC TGGTGGAGAA CCCGAGGCGG TCGATCGTCG TGCTGATCAC CGACTTCTAC
GAGGGCGGGG ACGAGCGCAA GCTGGTGCGC GTGGTGCGGG ACCTGGCCGC GCAGGGCACG
CAGGTGCTGG GGCTGGCGGC GCTGGACGAG GAGGCGTCGC CCGCCTACGA CCGGGACATG
GCGCAGAGGC TGGCGAACGT CGGCGCGCAC GTGGGCGCGA TGACGCCGGG CGAGCTGGCG
GAGTTCGTCG CGGAGAGGAT GGGGTAG
 
Protein sequence
MSDEMERWRL VLGSAADGCA GGLGGDALDR DVALTWLYER DDGLDERDVR RSGSGDSVLR 
VVDWLDDVHR LFPRRTVERL ERDAVETYGI TEVVTDPGVL ERVEPSVALL RAVMRTKHLM
NPAVLAMARR IVEAVVRDLM ARLAREVRRS FTGARSRRRS NFKQARNFDF RGTIRANLAH
YQPETRRISI EEPRFTSRTR KHLDSWQLVL VVDQSGSMAG SVIHSAVTAA CLWNLPGLKT
HLVAFDTQVV DLTSDVTDPV ELLMKVQLGG GTDIAKAMTY AAGLVENPRR SIVVLITDFY
EGGDERKLVR VVRDLAAQGT QVLGLAALDE EASPAYDRDM AQRLANVGAH VGAMTPGELA
EFVAERMG