Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1856 |
Symbol | |
ID | 8326041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2043266 |
End bp | 2045485 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942405 |
Product | hypothetical protein |
Protein accession | YP_003099650 |
Protein GI | 256375990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0763554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCCCG TTCTGCCCCG TCCCCGTCCC CTCGCAGCGG TGTTGGCGCT CGCCCTCGTG CCGCTCGCCC CGGTCACCCC GGCCGTCGCC TCGGCGCCCG GCGGGCTGAT CGCCCACTAC CCGCTCACCG AGTCCTCCGG GACCACCGCG CACGACGCGT CCCCCTCCCG CCGCGACGCC GTGATCAGCG GCGACGCCGT CCCCGGCGGA CGCGACGGCC TCCACCTCGG CGGCGTCGAC GGCCACGTCG ACCTCCCGGA CGACCTGCTG CGCGGCCTCG ACTCCGTCAC CGCCTCCATC CAGGTCCGCA TCGCGCCCGA CCAGGCCACG CCCTACTTCG TCTGGGGCAT CGGGAACACG AACGGCAGCG CGGGCGACGG CTACCTGTTC ACCACCGGCA ACGCCTACCG CAGCTCGATC GCCACCGGGA ACTGGTCCAC CGAGCAGACC ACCGGCTCGG GCCACGACCT GCGGCGCGAC GTGTGGAAGA CGCTCACCTA CACCCAGACC GGGAGCACCG CCGTGCTCTA CGAGGACGGC GTGGAGGTCG GCAGGCGCAC CGACGTGACG ATCCGCCCCG GCGACATCGG CGGCGGGTCC ACGAAGGCCA ACCACATCGG CCGATCGGTC TACCCCGGCG ACCGCCACCT CAAGGGCGAG GTGCGCGACT TCCGGCTGTA CGACAGGGCT TTGAGCGCCG ACGAGGCGCA CGGGCTCGGC TTCGTCCCCG ACCGTGAACG CGTCCGCAGG GACAGCGCGT CGCTGACCAT CGGCGACACC TCGCTCGTCA CCGAGGACCT CGTGCTCCCC ACCTCGGGCC CGCACGACAC CACGATCTCC TGGCACTCCA CCAATCCCGG CGCGGTCTCC GCCACCGGGG AGGTGACCCG CCCGCGCGCC GGCCTGCTGC CGTCGTCGGC GCTGCTCACG GCGACCACCA CCAGGGGCGA CGCCAAGCAG CGCAGGCTGT TCGCGGTCAC CGTCCGTCCG CAGCCCACCG ACCGCGAGAA GGTCGCCGAG GCCGTGAAGG CGCTGACCGT CTGGGACGCC GACGACGTGC GCGGCAACCT CACCCTGCCC ACCACCGGCC TGCACGGCAC GACGGTGACC TGGACCTCCA GCGCCCCCGA CGTCGTCACG CCCACCGGCG AGGTCACCAG GCCCGAGCAC GGGCAGCCCG CGGAGCGGGT CCGGCTCACC GCCTCGGTGG GATCGGGAAG CCGAACGGAG CTTCGGCACT TCGCACTCTC CGTCACCCCG AAGGCGGAGC GCGCCGCGTA CGAGGGCTAC TTCTTCGGCT ACTTCACCGG GGAGGGCTCC GCCACCGGCG AGCAGGTGCA CTTCGCCGCC TCGCGCGGCA ACACCCCGCT GCTGTGGGAC GAGCTCAACG GTGGCAGGCC GGTGCTCACC TCCGCGCGGG GCGACCGGGG CGTGCGCGAC CCGTTCGTCA TCCGCTCGCC CGAGGGCGAC AAGTTCTACC TCGTCGCCAC CGACCTCAAG ATCCACGGCA ACGGGAACTG GGACCTGGTG CAGCGCAAGG GGAGCAAGCA CGTCGAGGTG TGGGAGTCCA CCGACCTCGT CACCTGGTCG CAGCAGCGGC ACGTGCGCGT CGCCCCCGAC ACGGCGGGCA ACACCTGGGC GCCCGAGGCG TACTACGACG AGAGCATCGG CGCGTACGTG GTGTTCTGGG CCTCCAAGCT CTACGCCGAG GACGACCCCG AGCACACCGG CAACACCTAC AACCGGATGC TCTACGCCAC CACCCGCGAC TTCCGCACCT TCAGCGAGCC GCAGGTGTGG GTGGACCCCG GCTACTCGGT GATCGACTCG ACCGTCATCG AGCACGGCGG CCAGTACTAC CGCTTCACCA AGGACGAGCG GAACAACACG TCCACCACGC CGTGCAGCAA GTTCATCCTC GCCGAGCGCT CCACCTCGCT GCGCTCCACC TCCTACGAGC ACGTCGCCGA CTGCATCGGC AAGGGGGCCA TCGAGCGCGG CGAGGGGCCG ACGGTGTTCA AGTCCAACAC CGAGGACCGC TGGTACCTGC TCGTCGACGA GTTCGGCGGT CGCGGCTACG TGCCGTTCGA GACCACCGAC CTGGCCTCCG GCCGGTGGAC CCCGTCCACC GGCTACCAGC TGCCCGCGCG GCCCCGCCAC GGCACCGTCC TCCCGGTCAC CAAGGCCGAG CTGGACCGGC TGCGCGCGGC GTTCCCGTGA
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Protein sequence | MAPVLPRPRP LAAVLALALV PLAPVTPAVA SAPGGLIAHY PLTESSGTTA HDASPSRRDA VISGDAVPGG RDGLHLGGVD GHVDLPDDLL RGLDSVTASI QVRIAPDQAT PYFVWGIGNT NGSAGDGYLF TTGNAYRSSI ATGNWSTEQT TGSGHDLRRD VWKTLTYTQT GSTAVLYEDG VEVGRRTDVT IRPGDIGGGS TKANHIGRSV YPGDRHLKGE VRDFRLYDRA LSADEAHGLG FVPDRERVRR DSASLTIGDT SLVTEDLVLP TSGPHDTTIS WHSTNPGAVS ATGEVTRPRA GLLPSSALLT ATTTRGDAKQ RRLFAVTVRP QPTDREKVAE AVKALTVWDA DDVRGNLTLP TTGLHGTTVT WTSSAPDVVT PTGEVTRPEH GQPAERVRLT ASVGSGSRTE LRHFALSVTP KAERAAYEGY FFGYFTGEGS ATGEQVHFAA SRGNTPLLWD ELNGGRPVLT SARGDRGVRD PFVIRSPEGD KFYLVATDLK IHGNGNWDLV QRKGSKHVEV WESTDLVTWS QQRHVRVAPD TAGNTWAPEA YYDESIGAYV VFWASKLYAE DDPEHTGNTY NRMLYATTRD FRTFSEPQVW VDPGYSVIDS TVIEHGGQYY RFTKDERNNT STTPCSKFIL AERSTSLRST SYEHVADCIG KGAIERGEGP TVFKSNTEDR WYLLVDEFGG RGYVPFETTD LASGRWTPST GYQLPARPRH GTVLPVTKAE LDRLRAAFP
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