| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1846 |
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| Symbol | |
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| ID | 8326031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2031447 |
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| End bp | 2032724 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942395 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003099640 |
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| Protein GI | 256375980 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.169612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGAG CACTTCTGGT CGCAGCAGCC GCCGCGCTCG CGCTGGCGGG GTGTTCCAGC
GGCCCAGCGG ACGGCAAGGT GACGATCACC TTCTGGGACA ACAACGGCGG ACCCGGCCGC
ACCCCGATCT ACGAGGAGCT CATCAAGCGC TTCGAGGCGG CCAACCCCGA CATCCACGTC
GACTACGTCG GCATCCCCAG CTCGTCCGTG CAGCAGAAGT ACGACACCGC GATCGCGGGC
GGCGGCACGC CCGACGTCGG CGGCGTCACC ACCTCGTACC TGTCCAACAT GGTCGGGCAG
GAAGCGCTCG TGCCGCTGGA CGAGAAGGTC GACGGCGGCC CGCTCAAGGG CAAGCTGCTG
CCCAGCCTGG TCGAGACGGT CCGGCAGACC GCGCCCGACA ACAAGCTGTA CTCCGTCCCG
TCCTCCGGCA ACATGGACGT GATCTGGTAC CGGACCGACT GGTTCGCCGA GAAGGGCGTG
CAGCCGCCGA GGACCTGGGA CGAGTTCACC GCCGCCGCCG AGAAGCTCAC CGACGCCTCC
GCGAACCGGT ACGGCTACAC CATCCGGGGC GGCGCGGGCT CGGTGTTCCA GCTGCTCACC
GAGGCGTACG CCTACTCGGG CACCGACTCG TTCTTCGAGG GCGGCAAGTC CACGGTGGAC
GCCCCCGGCA ACGCCGACCT GGTGGAGAAG GTCGCGGCCC TGTACAAGAA GGCCACGCCC
GAGGCGGACG TCAACAACAA CTACACCCAG ATGGTCGCCC AGTTCACCGG CGGCTCGGCG
GCGATGATGC ACCACAACCT CGGTTCCTAC GGCGACGTCA CCAAGGCGCT GGGGGACAAG
GTGCAGGCGC TCCCGCTGCC GGTCGGCCCG AGCGGCAAGC GCACCGTCGT GCCCAACCCC
ACCGACGGCT TCGCGGTGTT CCGCAACAGC GAGAACCAGG ACGCCGCCTG GAAGTTCGTC
GAGTTCCTGA CCTCGGCCGA GAGCAACAGC TACTGGAACG AGAAGGTCGG CCAGATCCCG
GCCAACACCG ACGTGCGCTC GCAGCCGTGG ATCGAGCAGA ACAAGCCGGT GAAGATGGCG
CTGGACGTGC TGGAGGACCC GGCCACGATC ACCGTGCCCG CCCCGGTCTA CCTGCCGCAG
TACTCGTCCA TCACCAAGGC CGACAGCGAG CCCCAGTACC AGAAGGTGCT GCTCGGCCAG
CTCGGCGCCG ACGAGTTCCT CAAGGCCATG GCCGAGAAGC TGACCACCGC GCAGCAGGAG
TGGGAGGACC GGAAGTGA
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| Protein sequence | MRRALLVAAA AALALAGCSS GPADGKVTIT FWDNNGGPGR TPIYEELIKR FEAANPDIHV
DYVGIPSSSV QQKYDTAIAG GGTPDVGGVT TSYLSNMVGQ EALVPLDEKV DGGPLKGKLL
PSLVETVRQT APDNKLYSVP SSGNMDVIWY RTDWFAEKGV QPPRTWDEFT AAAEKLTDAS
ANRYGYTIRG GAGSVFQLLT EAYAYSGTDS FFEGGKSTVD APGNADLVEK VAALYKKATP
EADVNNNYTQ MVAQFTGGSA AMMHHNLGSY GDVTKALGDK VQALPLPVGP SGKRTVVPNP
TDGFAVFRNS ENQDAAWKFV EFLTSAESNS YWNEKVGQIP ANTDVRSQPW IEQNKPVKMA
LDVLEDPATI TVPAPVYLPQ YSSITKADSE PQYQKVLLGQ LGADEFLKAM AEKLTTAQQE
WEDRK
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