Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1844 |
Symbol | |
ID | 8326029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2029680 |
End bp | 2030555 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644942393 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003099638 |
Protein GI | 256375978 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.476032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGACGA AGACCTGGGC GCCCTACGCG CTGATCGCCC CCACGCTGCT GCTGATGGCG GTGTTCCTGG TCTACCCCAT CGGCAGCGTC CTGTACTACA GCTTCCAGGA CTACAACGTC ACCCAGCCCT GGAAGAACGG CTTCGCCGGG CTCGACAACT TCCGCGTGAT GCTGTTCGAG GACCCGCTGT TCTGGCAGAG CCTCGTGTTC AGCGCCAAGT GGGTGCTCGT CGAGGTCGGG CTCCAGCTGG CGCTCGGCCT GGTGCTCGCG CTGATCGTCA ACGAGACGTT CGTCGCCAGG GGCCTCGCCC GCGCGCTGGT CTTCTCGCCC TGGGCGGTCT CCGGCGTGCT CACCACGGGC ATCTGGATCC TGCTCTACAA CCCGTCCACC GGCATCTTCC AGCAGCTCGC CCAGTGGGGC ATCGGCGACG CGGGCACCTC GGTGCTGGGC AACCCGGACA CGGTGTTCCC GGCGACGGTG GTGACCGAGC TGTGGCGCGG CGTCCCGTTC TTCGCGATCA TGCTGCTGGC CGACCTCCAG ACCATCCCGA AGGACCTGTA CGAGGCGGCC TCGGTCGACG GCGCCAACCG GTGGCGTCGC TTCCTCAGCG TCACCCTGCC GCACCTGCGC GACGCCATCG TGCTGTCCAC GCTGCTGCGC GCGGTGTGGG AGTTCAACAA CGTCGACCTG ATCTACACCC TCACCGGCGG CGGACCCGCC AACCAGACCA CCACGCTGCC GCTGTACGTG GCGCGCAAGG CGGTCGACTC GCACGACTTC GGGTACGGCT CGGCGCTCAC CGTCGCCGGG TTCGTGATCC TGCTGTTCTG CTCGATCCTC TACCTGCGCC TGTCGAAGTT CGGGAGCCGA ACGTGA
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Protein sequence | MRTKTWAPYA LIAPTLLLMA VFLVYPIGSV LYYSFQDYNV TQPWKNGFAG LDNFRVMLFE DPLFWQSLVF SAKWVLVEVG LQLALGLVLA LIVNETFVAR GLARALVFSP WAVSGVLTTG IWILLYNPST GIFQQLAQWG IGDAGTSVLG NPDTVFPATV VTELWRGVPF FAIMLLADLQ TIPKDLYEAA SVDGANRWRR FLSVTLPHLR DAIVLSTLLR AVWEFNNVDL IYTLTGGGPA NQTTTLPLYV ARKAVDSHDF GYGSALTVAG FVILLFCSIL YLRLSKFGSR T
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