Gene Amir_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1830 
Symbol 
ID8326015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2013242 
End bp2014873 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content73% 
IMG OID644942379 
Productglycoside hydrolase family 5 
Protein accessionYP_003099624 
Protein GI256375964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCC GAATCGCGCT CGCGGCTGCC GCGGCGCTCC TGCTCTCCGC CTTCACCGCC 
CCACCTCCCG CACCCGCCGA AGCCGCCGCC CCCTCGGCCG CCGCAGCCGG GTTCACCATC
AGCGGCGGGA GGTTGCTGGA CGCCAACGGG AACGACTTCG TCCTGCGCGG CGTCAACCAC
GCCCACACCT GGTACCCCAC CCGCACCCGC CAGGCGCTCG CCGACGTCAA GGCGCTGGGG
GCCAACTCGG TCCGGGTCGT GCTCGCCAGC GGCGACCGCT GGACCCGCAA CGACGCAGCC
GACGTCGCGG ACGTCATCGC CCAGTGCAAG GCCAACCGGC TGATCTGCGT GCTGGAGGTG
CACGACACCA CCGGCTACGG CGAGCAGAGC GGCGCGATCC CGCTGTCCAA GGCGGTCGAC
TACTGGGTGG GCGTCAAGAG CGCCCTCGTC GGCCAGGAGA AGTACGCGAT CCTCAACATC
GGCAACGAGC CCTACGGCAA CACCGGGTAC GCGGCGTGGA CCGCCGACAC CCGCTCGGCC
CTGACCAGGC TGCGCGCCGA GGGCTTCACG CACACGATCA TGGTGGACGC GCCGAACTGG
GGCCAGGACT GGGCGTTCAC CATGCGCGAC AACGCGGCCT CGGTGTTCGC CGCCGACCCG
CAGCGCAACA CGATCTTCTC GATCCACATG TACGGCGTGT TCGACACCGC CGCCGAGGTC
GACGACTACC TCGGCCGGTT CGTCGCGGCC GGACTGCCCA TCGCGGTCGG CGAGTTCGGC
GACATGCACT CCGACGGCGA CCCGAACGAG GACGCCATCT TCGCCGCGGC GCAACGGCTC
CGGCTCGGCT ACCTCGCCTG GTCCTGGAGC GGCAACGGCG GCGGCGTGGA GTACCTGGAC
CTCGCGGTGG ACTTCAACGC CGCCCAGCTG AGCGCGTGGG GCCAGCGGAC CTTCAACGGC
GCCAACGGGA TCAAGGCCAC CTCGCGCGAG GCCAGCGTCT TCGGCGGCGG CGACGACACC
CGGGCCCCGA CCGCGCCCGG CACGCCCACC GCGTCCTCGG TCACCTCCTC CGGCGCGGTG
CTGGGCTGGT CCGCGTCCAC CGACAACGTC GGCGTCACCG GCTACGACGT GGTCCGGGTC
AGCGGGAGCA CCGAGACCGC CCTGGCCTCC ACGGCGACCA CCTCCGCCAC CCTGACCGGT
CTGACCGCCG CCACCGCGCA CACCCTCGCG GTGTACGCGC GCGACGCCGC GGGCAACCGC
TCCACCCGCT CCGGGACGGT CGTGGTCACC ACGCTCCCCG GCAGCCCCGT CGGCCCCTGC
GCCGTCACCT ACCGCGTCAC CGGCCAGTGG ACCGGCGGCT TCCAGGGCGA GGTGAAGATC
GCCAACACCG GCACGGCCGC CGTGAAGGGC TGGGTGCTGC GCTGGACGTG GCCCGGCGCG
CAGACCGTCA GCAGCATGTG GGGTGGCACG CCCACCCAGT CCGGTGCGAA CCTGAGCGTG
GCCAACGCCT CCTACACCGC CGACATCCCG GCGGGCGGCT CGGTCAGCGT CGGCTTCACC
GGCGGCGTCA CCGGCGCGAA CGCCGCGCCC ACCGCGTTCA CCCTCAACGG CGCGTCGTGC
GCCACCGCGT GA
 
Protein sequence
MRTRIALAAA AALLLSAFTA PPPAPAEAAA PSAAAAGFTI SGGRLLDANG NDFVLRGVNH 
AHTWYPTRTR QALADVKALG ANSVRVVLAS GDRWTRNDAA DVADVIAQCK ANRLICVLEV
HDTTGYGEQS GAIPLSKAVD YWVGVKSALV GQEKYAILNI GNEPYGNTGY AAWTADTRSA
LTRLRAEGFT HTIMVDAPNW GQDWAFTMRD NAASVFAADP QRNTIFSIHM YGVFDTAAEV
DDYLGRFVAA GLPIAVGEFG DMHSDGDPNE DAIFAAAQRL RLGYLAWSWS GNGGGVEYLD
LAVDFNAAQL SAWGQRTFNG ANGIKATSRE ASVFGGGDDT RAPTAPGTPT ASSVTSSGAV
LGWSASTDNV GVTGYDVVRV SGSTETALAS TATTSATLTG LTAATAHTLA VYARDAAGNR
STRSGTVVVT TLPGSPVGPC AVTYRVTGQW TGGFQGEVKI ANTGTAAVKG WVLRWTWPGA
QTVSSMWGGT PTQSGANLSV ANASYTADIP AGGSVSVGFT GGVTGANAAP TAFTLNGASC
ATA