| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1788 |
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| Symbol | |
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| ID | 8325973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1964330 |
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| End bp | 1965748 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942337 |
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| Product | beta-galactosidase |
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| Protein accession | YP_003099582 |
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| Protein GI | 256375922 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.586379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTCCA TTTCCTTTCC CGAGGGCTTC GTGTGGGGGG CCGCGACAGC GGCGTTCCAG
GTCGAGGGGG CGTCCAAGGA GGACGGTCGC TCCCCTTCCA TCTGGGACAC CTTCTGCGCG
CTGCCCGGCG CCGTCGCCGG TGGTGACAAC GGTGACGTGG CCGTGGACCA CTACCACCGG
GTCGAGCAGG ACGTCGCGAT GATGGCGGAC CTCGGCCTCG GCGCGTACCG CTTCTCCACC
GCCTGGCCGA GGATCCGGCC CGACGGCGGC GAGCCCAACC AGGCCGGGCT GGACTTCTAC
AGCAGGCTGG TCGACACCCT GCTGGAGCGC GGCATCGACC CGTGGGTCAC GCTCTACCAC
TGGGACCTGC CGCAGGCCCT GGAGGACGCG GGCGGCTGGG CCAACCGGGA CACCGCGCAC
CGGTTCGCCG ACTACGCGGC CACGGTCGTG GAGGCGCTCG GCGACCGGGT GTCCAACTGG
ACCACGCTGA ACGAGCCGTG GTGCTCGGCG TTCCTCGGCT ACGCGGGCGG CATCCACGCG
CCCGGCCGCC AGGAGCCCGC CGCCGCCGTC GCGGCCGTCC ACCACCTGCT GCTCGGCCAC
GGCCTCGCCA CCGCGGCGAT CCGCTCGGCC AAGCCGGAGG CCAAGGTCGG CATCACGCTC
AACATGTACC CGATCATCCC CGCCGACCCC TCGTCCGAGG CGGACCTGGA CGCGGTGCGG
CGGCTCGACG GGCTGCAGAA CCGGATCTTC CTGGACCCGC TGTTCAAGGG CGAGTACCCG
GCGGACATCG TCGCTGACCT CGCGCCGTAC GGGTTCGCCG ACCACATCAA GCCCGAGGAC
CTGGCGATCA TCTCGGCGCC GCTGGACCAG CTCGGCGTGA ACTACTACAC CGAGCACTTC
GTCAGCTCCG AGCCCGCCGC GCCCAGCGAG CCCAAGCCGG GCCGCCGCGC CACCGGGTCG
CCGTGGGTCG GGGCCGAGCA CGTCAGCTTC CCGGTCCGGG ACGACGCGAC GCGCACCGAC
ATGGAGTGGG AGGTGCGACC GCGCGGGATC TACCAGCTCC TCACCCGGCT GCACGAGGAG
TACCCGCGCC TGCCGATCTA CATCACCGAG AACGGCGCGG CGTACCGCGA CGCGGTGTCC
GACGACGGCT CGGTCAACGA CCCGGAGCGC CTGGCCTACA TCGACTCGCA CCTGCGCGCG
GCGCACGACG CGATCACCGA GGGCGTCGAC CTCCGCGGCT ACTTCGCGTG GTCGCTGATG
GACAACTTCG AGTGGGCCGA GGGTTACGCC AAGCGGTTCG GGATCGTGCA TGTCGACTAC
GGCACGCAGG TCAGGACGCC TAAGATGAGC GCCATGTGGT ACTCCGAGGT CGCCCGCGGC
AACGCGCTGC CCGCGCCGTC AGCGACGGCT GCGCCGTGA
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| Protein sequence | MESISFPEGF VWGAATAAFQ VEGASKEDGR SPSIWDTFCA LPGAVAGGDN GDVAVDHYHR
VEQDVAMMAD LGLGAYRFST AWPRIRPDGG EPNQAGLDFY SRLVDTLLER GIDPWVTLYH
WDLPQALEDA GGWANRDTAH RFADYAATVV EALGDRVSNW TTLNEPWCSA FLGYAGGIHA
PGRQEPAAAV AAVHHLLLGH GLATAAIRSA KPEAKVGITL NMYPIIPADP SSEADLDAVR
RLDGLQNRIF LDPLFKGEYP ADIVADLAPY GFADHIKPED LAIISAPLDQ LGVNYYTEHF
VSSEPAAPSE PKPGRRATGS PWVGAEHVSF PVRDDATRTD MEWEVRPRGI YQLLTRLHEE
YPRLPIYITE NGAAYRDAVS DDGSVNDPER LAYIDSHLRA AHDAITEGVD LRGYFAWSLM
DNFEWAEGYA KRFGIVHVDY GTQVRTPKMS AMWYSEVARG NALPAPSATA AP
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