| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1786 |
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| Symbol | |
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| ID | 8325971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1962498 |
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| End bp | 1963505 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942335 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003099580 |
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| Protein GI | 256375920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0186858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCG ACACCTCGGT GGCGAGCGGG CGGGGCGCTG CGCCCCGCCC GCCGCGGCGT
CCTGAGGGCG ACGACTCGGT GGGGCTCGTC GACCCCACCC GCCGCTACCG GTTCAGCAAC
CTCGACGCGA AGTTCTCGCC CTACCTGTTC GTGGCGCCGT TCTTCGTGCT GTTCACGGTC
GTCGGCCTGT TCCCGCTGCT GTACACCGCC TACATCTCCC TGTTCGACTG GGAGATCGGG
CTGGACGGCG AGTTCGTCGG CCTCGCCAAC TACGTCGAGC TGCTCGGCGA CCCGCAGTTC
TGGAACGCGA TGGTCAACAC GTTCAGCATC TTCCTGATGT CGAGCGTGCC GCAGATCATC
GTCGCCGTCC TGATCGCCGC GCTGCTCAAC ACCGCGCTGC GCGCCCGCAC CCTGTGGCGC
ATGGGCGTGC TGCTGCCCTA CGTGGCCAGC CTCGTCGCGC TCACCCTGAT CTTCGGCGAC
CTGTTCGGCG TCCAGTACGG CATGATCAAC GACTGGCTGG AGGCCGTCGG CCTCGACCGG
ATCAACTGGC AGGCCGAGCG CTGGTGGAGC CACGTCGCCA TCGCCACCAT GGTCGACTGG
CGCTGGACCG GCTACAACGC GCTCATCGTG CTCGCCGCCA TGCAGGCCAT CCCGCGCGAC
GTGTACGAGG CCGCGGTCGT CGACGGCGCG GGCACCATGC GGCGCTTCTT CAGCGTCACG
CTGCCCATGC TCCGCCCGAC GATCATCTTC GTCGTCATCA CCTCGACCAT CGGCGGCCTG
CAGATCTTCA CCGAGCCGCT GCTGTTCGAG CCCGCGGGCG GCAACGCCAA CGGCGGCGCC
AGCAACCAGT TCCAGACGGT GATGCTCTAC ATGTACCAGG CGGGCTTCGG CAGGTACGAG
CTCGGTTACG CCTCCGCGGT GGCCTGGGTG CTGTTCGTCG TCATCATCGC GATCGCCGGG
ATCAACTTCA TGCTCACCCG CCGGATCGCC TCCAGTGGGG AGGACTAG
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| Protein sequence | MTTDTSVASG RGAAPRPPRR PEGDDSVGLV DPTRRYRFSN LDAKFSPYLF VAPFFVLFTV
VGLFPLLYTA YISLFDWEIG LDGEFVGLAN YVELLGDPQF WNAMVNTFSI FLMSSVPQII
VAVLIAALLN TALRARTLWR MGVLLPYVAS LVALTLIFGD LFGVQYGMIN DWLEAVGLDR
INWQAERWWS HVAIATMVDW RWTGYNALIV LAAMQAIPRD VYEAAVVDGA GTMRRFFSVT
LPMLRPTIIF VVITSTIGGL QIFTEPLLFE PAGGNANGGA SNQFQTVMLY MYQAGFGRYE
LGYASAVAWV LFVVIIAIAG INFMLTRRIA SSGED
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