Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1784 |
Symbol | cobN |
ID | 8325969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1956717 |
End bp | 1960298 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942333 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_003099578 |
Protein GI | 256375918 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.174802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCTGC TGCTGTCGAC CTCCGACACG GACCTGCTGT CCGCACGAGC CAGCGGAGCC GACTACCGGC TCGGCAACCC GGCCAGGCTC GGCGTCGACG ACCTGCCCGA ACTCGTCGAG GGCGCCGACC TGGTGGTGGT GCGCATCCTG GGTGGCAGGC GCATCTGGGA GGAGGGCCTC GACCACCTCC TCGCGGGCCC GCGACCGGTC GTCGTGCTGG GCGGTGAGCA GAACCCGGAC GCCGAGCTGA TGGAGCTGTC CACGGTGCCC GGCGGGGTGT GTGCGGAAGC GCACACTTAT CTGGCCCACG GCGGTTCCGC GAACCTCGCG CAGCTGCACG CGTTCCTGTC CGACACGGTC CTGCTGACCG GCGTCGGCTT CGAGCCGCCC GTGGCCGCGC CCAACTGGGG CCTGCTGGAG CGCCCCGAGC CCGCCGGTGA CCCGGACGAG GGCACGCGGC CGACCGTCGC GGTGCTCTAC TACCGCGCCC ACCACGTGGC CGGGAACACC GCGTTCGTGC ACTCGCTGTG CGACGCCGTC GAGGCCAAGG GCGGCCGGGC GCTGCCGATC TTCTGCTCCT CGCTGCGCAC CGCCGAGCCC GAGCTGCTCG CCGAGCTGCG CAAGGCCGAC GCGCTCGTCG TGACCGTGCT CGCCGCGGGC GGCACCAAGC CCGCGACGGC CTCCGCCGGT GGCGACGACG ACGCGTGGGA CGTGGGCGCG CTCGCCGAGC TGGACGTGCC GATCCTGCAG GGCCTGTGCC TGACCAGCAG CCGCGCCGAC TGGGACGACA ACGACGACGG CCTCTCGCCG CTCGACACCG CCACCCAGGT CGCGATCCCC GAGTTCGACG GCCGCATCAT CACCGTCCCG TTCTCCTTCA AGGAGATCGA CGAGGACGGC CTGACCGTCT ACGTCGCCGA CCCCGAGCGG GCGCTGCGCG TCGCGGGCAT CGCGGTGCGG CACGGCAAGC TCCGGCACAC CCCGCCCGCC GACCGCAAGG TCGTGCTCAT GCTGTCGGCC TACCCGACCA AGCACTCCCG CATCGGCAAC GCGGTCGGCC TGGACACCCC GGCCAGCGCG GTCCGGCTGC TCGCCGCGCT GCGCGAGCAG GGCTACGACC TCGGCGAGGG CTTCCCCGGC CTGGACGACC TCAACGGCGA CGCGCTCATC CACGCCCTGA TCGCCGCCGG TGGCCAGGAC CCGGACTGGC TCACCGAGGA GCAGCTCCAG GGCAACCCGG TGCGGCTGCC CGCCGCCCGC TACCGCGAGT GGTACGGGAC GCTGCCCGAG GACGCCCGCG AGGACATGGA GCGGCACTGG GGCCCCGCGC CCGGCGAGCT GTTCGTGGAC CGCTCCCGCG ACCGCGACGG CGAGATCGTG CTCGCCGCCC TGCGCTCGGG CAACGTCGTG GTCATGGTGC AGCCGCCGCG CGGGTTCGGC GAGAACCCGA TCGCGATCTA CCACGACCCG GACCTGCCGC CCAGCCACCA CTACCTGGGC GCGTACCGCT GGCTGGAGGC CGAGTTCGGC GCCGACGCGG TCGTGCACGT CGGCAAGCAC GGCAACCTGG AGTGGCTGCC CGGCAAGACC GTCGGCCTGT CGGCGGGCTG CGGCCCGGAC GCCGCGCTCG GCGACCTGCC GCTGATCTAC CCGTTCCTGG TCAACGACCC CGGCGAGGGC ACCCAGGCCA AGCGCCGCGC CCACGCCACG CTCGTCGACC ACCTGGTGCC GCCCATGGCC CGCTCCGACA GCTACGGCGA CATCGCGCGC CTGGAGCAGC TGCTGGACGA GCACGGCAAC ATCGCCGCGA TGGACCCGGC GAAGCTGCCC GCCATCCGCG CCCAGATCTG GACGCTCATC CAGGCCGCGA AGCTCGACCA CGACCTGGGC CTGACCGACC GGCCGCACGA CGCCGAGTTC GACGAGCTGA TCCTGCACGT CGACGGCTGG CTGTGCGAGA TCAAGGACGT GCAGATCCGC GACGGCCTGC ACGTGCTGGG CGAGCCGCCG GTCGGCGCGG CGCGGGTCAA CCTGGTGCTG GCGATCCTGC AGGCCCCGCA GGTGTGGGCC GGGCAGGTCG CCGCGCTGCC GGGCCTGCGC GACGCGCTGG GCCTCAAGCA GGGCGCGGAC CGCCTCGACA CGGACGCCGC CGAGCAGCGG GCCCGCGAGC TGGTGCAGGC GATGGAGGAC GCCGACTGGG CGCCCGAGCA CGCCGCCACG CTCACGGACG ACCGGGACGT GGTGGGCATC CTGGAGTTCG GCGCCCGCGA GGTCGTGCCC AGGCTCGCCA GGACGACGGA CGAGATGACG CACGTGCTGC ACGCGCTGAG CGGCGGTTAC GTGCCCGCGG GCCCGAGCGG TTCGCCGCTG CGGGGCCTGG TGAACGTGCT GCCGACCGGC CGGAACTTCT ACTCGGTCGA CCCGAAGGCC GTGCCGTCCA GGCTGGCGTG GGAGACCGGG CAGGCCATGG CGGACTCGCT GCTGGAGCGC TACCGCGCCG AGACGGGGGA GTGGCCGCCG TCGGTGGGCC TGTCGGTGTG GGGCACCTCC GCCATGCGCA CCTCCGGCGA CGACATCGCG GAGGTGCTGG CGCTGCTGGG CGTGCGCCCG GTGTGGGACG AGCAGTCCCG CCGGGTGACC GGCCTGGCGG TCGTGGACCT GGAGGAGCTG GGCAGGCCGC GCATCGACGT GACCGTGCGC ATCAGCGGCT TCTTCCGCGA CGCGTTCCCG CACGTGGTGG CGCTGCTGGA CGACGCGGTG CGGTTGGTCT CGGACCTGGA CGAGTCGGAC TCGGACAACT TCGTGCGCGC CCACGTGCGC GCGGCGCTGG ACGAGCACGG CGACGACCGG CGCGCCACGA TGCGCATCTT CGGCTCCAAG CCGGGCGCGT ACGGCGCGGG CCTGCTGCCG CTGATCGACA GCCGGAACTG GCGCGACGAC GCCGACCTCG CCGAGGTGTA CGCGGTGTGG GGCGGGTACG CGTACGGGCG CGGTCTCGAC GGCGTGCAGG CCAGGCCGGA CATGGAGACC GCGTACAAGC GGATCGCGGT GGCGGCGAAG AACATCGACA CCCGCGAGCA CGACGTCATC GACTCGGACG ACTACTTCCA GTACCACGGC GGCATGGTGG CCACGGTGCG GGCGCTGACG GGCAAGGCCC CGAAGGCGTA CGTGGGCGAC AGCACCAGGC CCGACGCGGT GCGCACGCGG ACCCTGCACG AGGAGACGAA CCGGATCTTC CGGGCGCGCG TGGTGAACCC CCGGTGGTTG GCGGCGATGC GCAGGCACGG GTACAAGGGC GCGTTCGAGC TGGCGGCGAC GGTGGACTAC CTGTTCGGGT ACGACGCCAC GACCGGGGTG GTCGCGGACT GGATGTACGA GAAGCTCGCC GAGGCGTACG TGTTCGACGA GGAGAACCAG CGGTTCCTCA ACGAGAGCAA CCCGTGGGCG CTGCACGGCA TCACCGAGCG GCTGCTGGAG GCGGCGGACC GGGGGCTGTG GGAGCACCCG GAGCAGGCGA CGCTGGACGC GCTGCGGGCG GTGTACCTGA ACACCGAGGG GGACTTGGAG GACCGGCGCT GA
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Protein sequence | MILLLSTSDT DLLSARASGA DYRLGNPARL GVDDLPELVE GADLVVVRIL GGRRIWEEGL DHLLAGPRPV VVLGGEQNPD AELMELSTVP GGVCAEAHTY LAHGGSANLA QLHAFLSDTV LLTGVGFEPP VAAPNWGLLE RPEPAGDPDE GTRPTVAVLY YRAHHVAGNT AFVHSLCDAV EAKGGRALPI FCSSLRTAEP ELLAELRKAD ALVVTVLAAG GTKPATASAG GDDDAWDVGA LAELDVPILQ GLCLTSSRAD WDDNDDGLSP LDTATQVAIP EFDGRIITVP FSFKEIDEDG LTVYVADPER ALRVAGIAVR HGKLRHTPPA DRKVVLMLSA YPTKHSRIGN AVGLDTPASA VRLLAALREQ GYDLGEGFPG LDDLNGDALI HALIAAGGQD PDWLTEEQLQ GNPVRLPAAR YREWYGTLPE DAREDMERHW GPAPGELFVD RSRDRDGEIV LAALRSGNVV VMVQPPRGFG ENPIAIYHDP DLPPSHHYLG AYRWLEAEFG ADAVVHVGKH GNLEWLPGKT VGLSAGCGPD AALGDLPLIY PFLVNDPGEG TQAKRRAHAT LVDHLVPPMA RSDSYGDIAR LEQLLDEHGN IAAMDPAKLP AIRAQIWTLI QAAKLDHDLG LTDRPHDAEF DELILHVDGW LCEIKDVQIR DGLHVLGEPP VGAARVNLVL AILQAPQVWA GQVAALPGLR DALGLKQGAD RLDTDAAEQR ARELVQAMED ADWAPEHAAT LTDDRDVVGI LEFGAREVVP RLARTTDEMT HVLHALSGGY VPAGPSGSPL RGLVNVLPTG RNFYSVDPKA VPSRLAWETG QAMADSLLER YRAETGEWPP SVGLSVWGTS AMRTSGDDIA EVLALLGVRP VWDEQSRRVT GLAVVDLEEL GRPRIDVTVR ISGFFRDAFP HVVALLDDAV RLVSDLDESD SDNFVRAHVR AALDEHGDDR RATMRIFGSK PGAYGAGLLP LIDSRNWRDD ADLAEVYAVW GGYAYGRGLD GVQARPDMET AYKRIAVAAK NIDTREHDVI DSDDYFQYHG GMVATVRALT GKAPKAYVGD STRPDAVRTR TLHEETNRIF RARVVNPRWL AAMRRHGYKG AFELAATVDY LFGYDATTGV VADWMYEKLA EAYVFDEENQ RFLNESNPWA LHGITERLLE AADRGLWEHP EQATLDALRA VYLNTEGDLE DRR
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