Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1751 |
Symbol | |
ID | 8325936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1921062 |
End bp | 1922324 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644942300 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003099545 |
Protein GI | 256375885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00152949 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGTCG CATCCGTCCG TCCCACTGAT CGAGTGAAGG GGCGGGTGCC GGGCACCGTT TTCGCCCTGG GCGCGGTGAG CCTGCTCACC GACGTGTCCG CGGAGATGGT CACCGCCTTC CTGCCCGCGT ACCTGCTGTT CACGCTGCAG ATGAGCTACG CGCAGTTCGG GGTGCTGGAC GGGTTGTACA CCGGGGCCAC GGCGGTGCTA CGGCTGGTGG GCGGGCACCT GTCGGACAAG ACGCAGCGGC ACAAGGCGGT CGCGGTGTTC GGGTACGGGC TGTCCGCGGT GACGAAGCTG GTGTTCCCGG CGGTGGGGGC GTCCGCGTTC GGGATCGGGG CGACGATGGC CGCCGACCGG GCGGGCAAGG GGATGCGGAC GGCGCCTCGG GACGCGCTGA TCTCGTTGTC GACGCCGCCG GATCGGCTGG GGGCGGCGTT CGGGCTGCAC CGGACGATGG ACACGGCCGG GGCGTTGCTG GGGCCGTTGG TGACGTTCTT GCTGATGACC AATATTGGGA TTGTGGCTGG GCCGGTTTTT GCGGTTAGTG CTTGTTTTGC GTTCGTGGGT GTGATCGTGC TGGTGGCGTT CGTGCGGGAG CACCGGGCGG CCAAGCCGGC CGGGCCTTCG CCCTCGTTCC GGGCCGGGGT CGGGTTGTTG CGGGATGCCC GGTATCGGCG GGTTGCGGTT GGCACCGGGT TGTTGGGGTT GGCCACGTTG TCGGATGCGT TTGTTTTCAT CCTGGTGCAG AAGGCGACCG GGATTCCGCA GGGGTTGTTG CCGTTGTTGC CGTTGGGGAC GGCGTTGGTT TTTCTGGTTG CGGCTACGCC CATGGGGCGG TTGTCGGATC GGGTGGGGAG TTGGAACGTG TTCCTGGGGG GGCACGTTTT GTTGCTCGTG GTTTATTTGC TGTTGCTGGT TCCGGGGAGC GGGTACGTGG GGGCCGGGGT TGCCCTGGTG TTGCACGGGT TGTTCTACGC GTGCAGCGAT GGGGTGCTGT CGGCTCGGGT CAGTCCGCTG GTTCCGGAGT CGTTGCGGGC TTCGGGGTTG GCCGTGGTGC AGACGGGGCA GGCTTTGACC CGGACTGTGT CTTCGGTTGG GTTTGGGGTT TTGTTGCAGT TCGCGGTTTT TGGGGTTGCG GTGTGGACTG CGATTGTGGC TTTGGTTGTC GGGGTGGGCG GGGCTTGGTG GTTGACGGCT CGGGATGGGG ATGGGGGCGG GGGCGGAGAT GGGGGCGGGG CTTCGGCTTC CGCTTCGGTT TAG
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Protein sequence | MYVASVRPTD RVKGRVPGTV FALGAVSLLT DVSAEMVTAF LPAYLLFTLQ MSYAQFGVLD GLYTGATAVL RLVGGHLSDK TQRHKAVAVF GYGLSAVTKL VFPAVGASAF GIGATMAADR AGKGMRTAPR DALISLSTPP DRLGAAFGLH RTMDTAGALL GPLVTFLLMT NIGIVAGPVF AVSACFAFVG VIVLVAFVRE HRAAKPAGPS PSFRAGVGLL RDARYRRVAV GTGLLGLATL SDAFVFILVQ KATGIPQGLL PLLPLGTALV FLVAATPMGR LSDRVGSWNV FLGGHVLLLV VYLLLLVPGS GYVGAGVALV LHGLFYACSD GVLSARVSPL VPESLRASGL AVVQTGQALT RTVSSVGFGV LLQFAVFGVA VWTAIVALVV GVGGAWWLTA RDGDGGGGGD GGGASASASV
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