Gene Amir_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1736 
Symbol 
ID8325921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1904193 
End bp1904849 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content76% 
IMG OID644942285 
Producttransferase hexapeptide repeat containing protein 
Protein accessionYP_003099530 
Protein GI256375870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGC GACCGCTGCT GCTGGTCGGG GGAGGGGGGT TGGCGCGCGA GGTGCTCGCC 
GCCGCCCGCC TCGCACCGGG GGAGTGGGCA CCGCTCGGCG CGCTCGACGA CGATCCGACC
AAGCACGGGC AGGCCCTCGA CGGCCTGCCC GTGCTGGGCG GTTCCGAGCT CGTGCACGAG
CACCCCGATG CCGCCGTCGT GGTGTGCGTC GCCAGCGCCC GCCGCCCGCT CGGGCGGCTC
GCGCTGGCCG GGAAGCTCGG CTTGGGGCAG GACCGGTACG GCACGATCAC GCACCCCGGC
GCGCACGTCG CGCCGGGGTG CGTGATCGGT CCGGGGACGG TCCTGCTCGC AGGCGTCGTG
GTGACCACCC CGCTGCGCCT GGGCGCGCAC GTGGTCGCCA TGCCGCACGT GATCATCACC
CACGACGACG AGATCGGCGA CGGGGTCACC TTCGCCGGCG GCGCGTCGCT GGGTGGGGCG
GTCCGCGTCG GGGAGAGCGC CTACCTGGGA CAGCGCGCAG CCGTCCGGGA GGGCCTCGCG
ATCGGCGCGG GCGCAGTCGT GGGCATGGGA GCGGTCGTGC TGGCCGACGT GCCCGCGGGC
GAGGTCTGGG CGGGCGTCCC GGCCAGGCGA ATCCTTCGAG AGGGGAACCG CACGTGA
 
Protein sequence
MTPRPLLLVG GGGLAREVLA AARLAPGEWA PLGALDDDPT KHGQALDGLP VLGGSELVHE 
HPDAAVVVCV ASARRPLGRL ALAGKLGLGQ DRYGTITHPG AHVAPGCVIG PGTVLLAGVV
VTTPLRLGAH VVAMPHVIIT HDDEIGDGVT FAGGASLGGA VRVGESAYLG QRAAVREGLA
IGAGAVVGMG AVVLADVPAG EVWAGVPARR ILREGNRT