Gene Amir_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1670 
Symbol 
ID8325855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1824222 
End bp1824917 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content76% 
IMG OID644942220 
Producturea ABC transporter, ATP-binding protein UrtE 
Protein accessionYP_003099465 
Protein GI256375805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.161452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCGG TGTCCGATGT GGACGTCCAC TACGGACGAT CCCAGGTGCT GTTCGGCGTG 
GGCCTGGACG TGCCCGCCGG GTCGCTGGTG TGCGTGCTGG GGCGCAACGG GGTCGGGAAG
ACGACGCTGC TCAAGACCGT CGTCGGCCTG CTGCGCCCGA CCTCGGGGAC GGTGCTGCTG
GACGGTGTGG ACGTCACCCG GACCCCGGTG CACCGCAGGG TGCGCGCGGG GCTGGCGTAC
GTGCCGCAGG GGCACGTGGT GTTCCCGCAG CTGACCGTGG CGGAGAACCT GCGGGTGGTC
GCCGAGGCCC GGCCCGGCAA GGACGCGGGC GCGGTGGACG ACGCGCTGTC GGTGTTCCCG
GCGCTGGTCC CGCTGCTGCG GCGGCGGGCC GGGCTGCTGT CGGGCGGGCA GCGGCAGCAG
CTGGCGATCG CGCGGGCGCT GGTGGCGCGG CCCCGGCTGC TGGTGCTGGA CGAGCCGACC
GAGGGCGTGC AGCCGTCCGT GGTCGACGAG ATCGAGGCGG CGGTGCGGCG GCTGCACCGG
GAGGTGGGGC TGACCGTGCT GCTGGTCGAG CAGCACGTGG ACCTGGCGGC GCGGCTGGCG
GACCGGTTCG CGCTGCTGGA CGCGGGCGAG GTGGTGCGCT CCGGCGACGC GGCGGAACTG
CGGGGCGAGG AGGTGCGGCG GCTGCTGTCG GTGTGA
 
Protein sequence
MLAVSDVDVH YGRSQVLFGV GLDVPAGSLV CVLGRNGVGK TTLLKTVVGL LRPTSGTVLL 
DGVDVTRTPV HRRVRAGLAY VPQGHVVFPQ LTVAENLRVV AEARPGKDAG AVDDALSVFP
ALVPLLRRRA GLLSGGQRQQ LAIARALVAR PRLLVLDEPT EGVQPSVVDE IEAAVRRLHR
EVGLTVLLVE QHVDLAARLA DRFALLDAGE VVRSGDAAEL RGEEVRRLLS V