Gene Amir_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1603 
Symbol 
ID8325787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1767241 
End bp1767810 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content70% 
IMG OID644942152 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099398 
Protein GI256375738 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0115969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG TTCCGGAGCG GCTGATCACC GCAGCGACGC GCTTGTTCGC CGCCAAGGGG 
TACGACCGGG TGGCGGTGCA GGAGGTCGTG GAGCAGGCGG GCGTCACCAA AGGGGCCATG
TACCACTACT TCGGGTCCAA GGACGACCTG CTGGCGGAGA TCTACGGGCG GCTGCTGCGG
ATGCAGACGG AGCGCCTGGA GCACTTCGCG GCGGCCGAGG GCCCGGTGGA CGAGCGCCTG
CGGGCGGCGG CGGTGGACGT CGTGGTGACG AGCGTGGACA ACTTCGACCA GGCGAAGGTC
TACTTCCGCT GCGCCGACCA CCTGCCGGAG GACAAGCGGC TGGGGCTGCG CGCGGAGCGG
CGGCGGTACC ACGAGCGGTT CCGGGGGTTG GTGGAGCAGG GGCAGGCGGA GGGGGTGTTC
TCGCCTGCGG CGCCTGCGGA TCTGGTGGTG AACTACTTCT TCGGGGCGGT GCACCACCTG
GCCGAGTGGT ACAGCGCGGA GGGGGCGCTG ACGGCGGGGC AGGTGGGGGA GCACTACGCG
GATCTGCTGA TCAGCTCTCT GCGGGCTTGA
 
Protein sequence
MATVPERLIT AATRLFAAKG YDRVAVQEVV EQAGVTKGAM YHYFGSKDDL LAEIYGRLLR 
MQTERLEHFA AAEGPVDERL RAAAVDVVVT SVDNFDQAKV YFRCADHLPE DKRLGLRAER
RRYHERFRGL VEQGQAEGVF SPAAPADLVV NYFFGAVHHL AEWYSAEGAL TAGQVGEHYA
DLLISSLRA