Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1587 |
Symbol | |
ID | 8325771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1749176 |
End bp | 1750561 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942136 |
Product | hypothetical protein |
Protein accession | YP_003099382 |
Protein GI | 256375722 |
COG category | [S] Function unknown |
COG ID | [COG4320] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGAGC GCAAGCGGGC GTTGGCGGCC AAGGCGCTGG GGCGGTGGAC CGAGCCGGAC GAGGTGCGGG CGCGTGGCCG GGAGCTGCGC GCCACCACCG GTCCCGAGGC GCACCGGGAG TTCGTCACGG CCCCGGACCG CCCCTCCGTC GTGGAGTACG TGACCGCCAC GAACGAGGGA CGCCTGCCGA ACCTCGTGCC GCTGCGCCTC CAGCGGATGC TCGTCTCCCC GTTCGCGTTC TTCCGGGGCA GCGCGGGCCT GATGGCGGGC GACCTGGCCG CCGGACCCCG CAGCGGGCCC GTCGCGCAGC TGTGCGGCGA CGCGCACGCG GCCAACTTCG GGCTGTACGG CACGCCCGAG GGCAAGATCG TCATGGACGT CAACGACTTC GACGAGACGC TCCCCGGCCC GTGGGAGTGG GACCTCAAGC GCCTGGCCGC CTCGCTCGTG CTCGCCGGGC GCGAGGGCGG CGTGTCCGAG AAGGGCTGCC GCGGCGCCGC CGAGGACGCG GTGCGCGCCT ACCGGGGCGC GGTCCGGCAC CTCGCCGCCC TGCCGTTCCT GGAGTCCTGG AGCGCGCTCG GCGACGAGTC CGTGCTGTCC AGGGCCAAGG CCGACGACCT CGGCGAGGAG TTCGCCAAGG CCGCAGCCAA GGCCCGCCGC AACACCAGCG CCAAGGTCGC CGCCAAGTGG ACCACCCGCG AGGACGGGCA CTGGCGCTTC GTCACCGACC CGCCCGTGCT CGACCGGGTC ACCGAGGACA CCGCCCGCGC CGTCGTGGAC GCCCTGCCGT CCTACGTGGA CACCCTGCGC GAGTCCCGCT ACAACCTGAT CATGCGCTAC GGCGTGTCCG ACGTGGCGTT CCGCGTCGTC GGCACCGGCA GCGTCGGGCT GCGCAGCTAC CTGGTCCTGA TGCACGGCAA CGGCGACGAG GCGCTCGTGC TCCAGGTCAA GGAGGCCAGG CCCTCCGCGC TCGCGCCGTT CCTCGGCCTG CCGCCCGCCA AGCACGAGGG CAAGCGGATC GTGCACGGCG CCCGGCTCGT GCAGGCCGAG ACCGACATCC TGCTCGGCTG GACCACCGTG CAGGGGCGGC CCTTCATCGT CCGGCAGTTC CGCAACCGCA AGGGCGAGAT CGACCCGACC CTGCTGCGGC GCGCCGAGCT GGAGGACTAC GGCCGGTTCG CGGGCGCCCT GCTCGCCCGC GCGCACAGCC GCTCCCTGGA CCCCAGGCTG CTCGACGGCT ACTTCACCGG CGCGGGGGAG GAGTTCGACG AGGCCTTCGC AGGCTACGCC GTCGACTGCG CGGACCGCAC CCGTGCGGAC CACGCCGAGT TCGTCCGGGC GGTCCACTCG GGGGTGTTCC CCTCCCTCGG CGTGGAACAC GGGTAA
|
Protein sequence | MGERKRALAA KALGRWTEPD EVRARGRELR ATTGPEAHRE FVTAPDRPSV VEYVTATNEG RLPNLVPLRL QRMLVSPFAF FRGSAGLMAG DLAAGPRSGP VAQLCGDAHA ANFGLYGTPE GKIVMDVNDF DETLPGPWEW DLKRLAASLV LAGREGGVSE KGCRGAAEDA VRAYRGAVRH LAALPFLESW SALGDESVLS RAKADDLGEE FAKAAAKARR NTSAKVAAKW TTREDGHWRF VTDPPVLDRV TEDTARAVVD ALPSYVDTLR ESRYNLIMRY GVSDVAFRVV GTGSVGLRSY LVLMHGNGDE ALVLQVKEAR PSALAPFLGL PPAKHEGKRI VHGARLVQAE TDILLGWTTV QGRPFIVRQF RNRKGEIDPT LLRRAELEDY GRFAGALLAR AHSRSLDPRL LDGYFTGAGE EFDEAFAGYA VDCADRTRAD HAEFVRAVHS GVFPSLGVEH G
|
| |