Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1488 |
Symbol | |
ID | 8325668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1643453 |
End bp | 1644709 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942035 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003099285 |
Protein GI | 256375625 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGATCA CCGACGTCGT CGTCACCCCC ATCGCCTTCC CCGACCCGCC GCTGCTCAAC TCGGTCGGCG TGCACGAGCC GTGGGTGCTG CGCACGGTCG TCGAGGTCCG CACCGACGCG GGCCTCACCG GTCTCGGCGA GACCTACGGG GACATCGGCC ACCTGAACCG GGTCCGGGCC GCCGCGCCCG CCCTCACCGG GCTGGACGTC CACGACCTCA ACGGCATCCG CGCCCGCGTG TCCACCGCCC TCGGCGGCCA GGCGGGCTCG GACCGGCACG GGCTCACCGG GCAGCTCACC GTCGAGTCCA CGGTCGACCG GGTGTTCTCC CCGTTCGAGG TCGCCACCTG GGACATCCGG GGCAAGGCCC TGGACCGCCC CGTGGTCGAC CTGCTCGGCG GCGCCGTCCG CGACGCCGTC CCGTACAGCG CCTACCTGTT CTACAAGTGG GCAGGCCACC CCGGCGCGGA GCCCGACGAG TGGGGCGCCG CGCTCGACGC CGACGGCGTC GTCGCCCAGG CGCGGGAGCT GACCGGCAGG CACGGCTTCC GGTCGATCAA GCTCAAGGGC GGCGTGCTGC CGCCCGACGA GGAGGTCGCC GCGATCCGCG CCCTGCGCGA GGCGTTCCCC GACCACCCGC TGCGGCTCGA CCCCAACGCG GCCTGGTCGC CGACCACCGG GCTCAAGGTC GCGCACGAGC TGGACGGCGT CCTGGAGTAC CTGGAGGACC CCAGCCCGGA GATCGAGGGC ATGGCCGAGG TCGCCGCCGG GTCGCCGCTG CCGCTGGCCA CCAACATGTG CACGATCGCG TTCGAGCACC TCGCGCCCTC CGTGGCGGCG GGCGCGGTGC AGGTCGTGCT GTCCGACCAC CACTACTGGG GCGGGCTGGC CAGGTCCAAG GAGCTGGCGG CGATCTGCCG GACGTTCGGC GTCGGGCTGT CCATGCACTC CAACTCGCAC CTGGGCATCA GCCTGGCCGC CATGACCCAC CTGGCCGCCG CCACGCCCAA CCTGGACTAC GCCTGCGACA CGCACTACCC GTGGAACAGC GCGTGGGACG TGCTCACCGA GCCGCTGTCC TTCGTGGACG GCGCGCTGCC CGTGCCCACC GGCCCCGGCC TCGGCGTCGA GCTGGACCGG GACAAGCTCG CCGCGCGCGC CGAGGACTAC CGCCGCTGCG GCATCGTGCA GCGCGACGAC ACCGGCTACA TGCGGACCAT CGACCCCGGC TACGAGAGGA GACGACCCCG GTGGTGA
|
Protein sequence | MRITDVVVTP IAFPDPPLLN SVGVHEPWVL RTVVEVRTDA GLTGLGETYG DIGHLNRVRA AAPALTGLDV HDLNGIRARV STALGGQAGS DRHGLTGQLT VESTVDRVFS PFEVATWDIR GKALDRPVVD LLGGAVRDAV PYSAYLFYKW AGHPGAEPDE WGAALDADGV VAQARELTGR HGFRSIKLKG GVLPPDEEVA AIRALREAFP DHPLRLDPNA AWSPTTGLKV AHELDGVLEY LEDPSPEIEG MAEVAAGSPL PLATNMCTIA FEHLAPSVAA GAVQVVLSDH HYWGGLARSK ELAAICRTFG VGLSMHSNSH LGISLAAMTH LAAATPNLDY ACDTHYPWNS AWDVLTEPLS FVDGALPVPT GPGLGVELDR DKLAARAEDY RRCGIVQRDD TGYMRTIDPG YERRRPRW
|
| |