Gene Amir_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1486 
Symbol 
ID8325666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1641430 
End bp1642212 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID644942033 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003099283 
Protein GI256375623 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGGAG GCACGTCACC CGCTCGGCCG AACGCGGTGA AGTCGGCGGA CCGGACCGTG 
GAACTGCTGG AGGTGCTGTC CTCCTCGGAG CGCCCGCTCA CCCTCACCGA GCTGCACCGC
GAGCTGAGCT ACCCGAAGTC CAGCCTGTAC ATGCTGCTCC AGACCCTCGT GGCGCGGGGC
TGGGTGGAGC TGGACTCCAC CAGGGGCACG TACGGCATCG GGGTGAGGGC GCTGCTCGTC
GGCACCTCGT ACCTCGACCA CGACCCGGTG GTGCAGGTCG CCATCCGGGT GATGGAGCAG
GTCAGGCGCG AGGTCAACGA GACCGTGCAC CTGGCGCGGC TCGACGGCTC GGACGTGGTC
TACCTGGCCA GCCGCGAGTC CGAGCACCAC CTGCGGGTGG TCTCGCGCGT GGGCAGGCGG
CTGCCCGCGC ACTCCACGTC GCTGGGCAAG GCGGTGCTGG CCGCGCGCAC CCCGCAGGAG
GTCGACGCCG TCCTGCCGGC CACGCTGGAC CCGCTCACCC AGAACACCGT CACCGACCGG
GCGGCGCTGC ACGCGCAGCT CGCGGGCTTC CGCGGGGTGG GCTACGCCCA CGAGCGCGAG
GAGAACACGC CCGGTCTCGG CTGCTTCGCG GTGGCGCTGC CCTACCGCAC GCCCGTGCTC
GACGCGATGA GCTGCTCGGT GCCGCTGGGC AGGCTCGACG GCGAGCACGA GCGCCAGGTG
GTGGGGGCGC TGCTGCACGC GGCCCGCACC GTCACCGAGC TGCTGCGGCA GTTCGGCCGC
TGA
 
Protein sequence
MAGGTSPARP NAVKSADRTV ELLEVLSSSE RPLTLTELHR ELSYPKSSLY MLLQTLVARG 
WVELDSTRGT YGIGVRALLV GTSYLDHDPV VQVAIRVMEQ VRREVNETVH LARLDGSDVV
YLASRESEHH LRVVSRVGRR LPAHSTSLGK AVLAARTPQE VDAVLPATLD PLTQNTVTDR
AALHAQLAGF RGVGYAHERE ENTPGLGCFA VALPYRTPVL DAMSCSVPLG RLDGEHERQV
VGALLHAART VTELLRQFGR