| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1350 |
|---|
| Symbol | |
|---|
| ID | 8325530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1491949 |
|---|
| End bp | 1493670 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941898 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_003099148 |
|---|
| Protein GI | 256375488 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCT CCGTTCCGAT GCCCGCACTC GGTGAAAGCG TCACCGAGGG CACGGTCACC
CGCTGGTTGA AGCAGGAGGG CGACCGGGTC GAGGTCGACG AGCCGTTGCT CGAGGTCTCG
ACCGACAAGG TCGACACCGA GATCCCCTCG CCCGCCGCGG GCGTCCTGCA GAAGATCGTC
GCCCAGGAGG ACGAGACCGT CGAGGTCGGC GCCGAGCTGG CGGTGATCGG CGACGGTTCC
GACAACGACG CGGCCAGCGC TCCGGCCGAC TCGGCTCCCG CGCCCGCCGC GCCCGCCGAG
GAGGCTCAGC CCGAGCCGCA GTCCGACCCC GAGCCCGAGA CCGAGGCCGC CCCGTCCGGC
GGCAGCGCCG ACGGCACCCC GGTGACCATG CCCGCGCTGG GCGAGAGCGT CACCGAGGGC
ACCGTGACCC GCTGGCTCAA GCAGGTCGGC GACTCGGTGG AGGTCGACGA GCCCCTGCTG
GAGGTCTCGA CCGACAAGGT CGACACCGAG ATCCCGTCCC CGGTGGCGGG CACGCTGCTG
GAGATCACCG CGGGCGAGGA CGAGACGGTC GAGGTCGGCG GCAAGCTGGC CGTGATCGGC
TCGGGCGCGC CCGCGAAGCA GGAGGCCCCG AAGGCCGCTC CGGCTCCCGA GGCCCCCAAG
CAGGAGGCTC CCAAGGCCGA GGCGCCCAAG CAGGAGGCCC CCAAGGCCGA GGCCCCCAAG
CAGGAGGCCC CGAAGCAGGA GGCTCCCAAG CAGGCCGCTC CGGCCGCCGA GAAGTCCGGT
GACGAGGGCG CGCCCTACGT CACCCCGCTG GTGCGCAAGC TGGCCTCGGA GAACGGCATC
GACCTCGGTT CCCTGAAGGG CACCGGCGTC GGCGGTCGCA TCCGCAAGCA GGACGTGCTG
GCCGCCGTCG AGGCCAAGAA GGCCCCGGCC GCCGCGCCCG CCGCCGCTGC CGCCCCGGCC
GCGCCCGCCG CCAAGTCCGC GCCCGTGGAC ACCAGCGGCA AGCGCGGCAC CACGCAGAAG
CTCCCCCGCC TGCGCCAGAT CGTGGCCCAG CGGACCCGCG AGTCGCTGCA GATGTCGGCC
CAGCTCACCC AGGTGTTCGA GGTGGACGTC ACCCGGATCG CGCGCCTGCG CAGCCGGGCG
AAGTCCGCGT TCGAGCAGCG CGAGGGCACG AAGCTCACGT TCCTCCCGTT CTTCGCCAAG
GCGGCGGTCG AGGCCCTGAA GCAGCACCCG GTGCTGAACG CCTCCATCGA CGAGGCGAAG
AAGGAGGTCA CGTACCACGG CTCCGAGCAC CTCGGCATCG CGATCGACAC CGAGCGCGGC
CTGCTCAACG CGGTGATCTC GAACGCGGGC GAGCTGAACC TGGCCGGCCT GTCGCTCAAG
ATCAACGACC TGGCCGGTCG GGCGCGCGGG AACAAGCTGA CCCCGGACGA GCTGACCGGC
GGCACGTTCT CGCTGACCAA CCTGGGCAGC AACGGCGCCC TCTTCGACAC CCCGATCATC
CAGCAGCCGC AGGTCGGCAT CCTGGGCGTC GGCGTGGTCA AGAAGCGCCC CGTGGTGATC
ACCGACGCCA ACGGCGACGA CACGATCGCG ATCCGGTCCA TGGCCTACCT GGCCCTGACC
TACGACCACC GCCTGGTGGA CGGCGCGGAC GCCGGTCGCT TCCTGAGCAC CATGAAGAAC
CGCCTGGAGG AAGGCGCCTT CGAGGGCGAC CTCGGCCTCT GA
|
|---|
| Protein sequence | MAISVPMPAL GESVTEGTVT RWLKQEGDRV EVDEPLLEVS TDKVDTEIPS PAAGVLQKIV
AQEDETVEVG AELAVIGDGS DNDAASAPAD SAPAPAAPAE EAQPEPQSDP EPETEAAPSG
GSADGTPVTM PALGESVTEG TVTRWLKQVG DSVEVDEPLL EVSTDKVDTE IPSPVAGTLL
EITAGEDETV EVGGKLAVIG SGAPAKQEAP KAAPAPEAPK QEAPKAEAPK QEAPKAEAPK
QEAPKQEAPK QAAPAAEKSG DEGAPYVTPL VRKLASENGI DLGSLKGTGV GGRIRKQDVL
AAVEAKKAPA AAPAAAAAPA APAAKSAPVD TSGKRGTTQK LPRLRQIVAQ RTRESLQMSA
QLTQVFEVDV TRIARLRSRA KSAFEQREGT KLTFLPFFAK AAVEALKQHP VLNASIDEAK
KEVTYHGSEH LGIAIDTERG LLNAVISNAG ELNLAGLSLK INDLAGRARG NKLTPDELTG
GTFSLTNLGS NGALFDTPII QQPQVGILGV GVVKKRPVVI TDANGDDTIA IRSMAYLALT
YDHRLVDGAD AGRFLSTMKN RLEEGAFEGD LGL
|
|---|
| |