Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1341 |
Symbol | |
ID | 8325521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1484020 |
End bp | 1484943 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941889 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003099139 |
Protein GI | 256375479 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0989891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAAGT GGACCGAAGT CGACATCCCC GACCAGGCAG GGCGCACCGC GCTGGTGACC GGCGCGAACT CGGGCCTGGG CCTGCGCACC GCCGAGGTGC TGGCCGCCAA GGGCGCCAGG GTGCTGCTGG CCTGCCGCTC CGGGGAGCGC GGCCTGGCCG CCGTCGAGCG GGTCTCCCGG CACGGCGAGG CCGAGTTCGT GCGGCTGGAC CTGGGCGAGC CGGCGTCGGT GCGCGCCGCC GCCGAGCGGG TCCAGGAGCT GGCGGGCGAC GGGCTGGACC TGCTGGTCAA CAACGCGGGC CTGATGGCCC CGCCGCTCGC CCGCACCGCC GACGGGTTCG AGTCGCAGTT CGGCGTCAAC CACCTGGGGC ACGCCGCGCT GACCTGGCTG CTGATGCCCG CGCTGCGGGC CCGCGCGGGC GCCCGCGTGG TGACCGTGTC GTCCGTGGCG CACCGGTTGG GCGGCCTGGA CCTGGCCGAC CCGAACTTCG AGGTGCGCCG CTACGCCCCG TGGGTCGGCT ACGGCCAGTC CAAGCTCGCG AACCTGCTGT TCGCGCGGGA GCTGGACCGG CGGCTGGCGC GGTCCGGCGC GGACGTGACC TCCGTCGCTG CGCACCCCGG CGTCTCGCGG ACCGAGCTCA GCTCGACCAT GGCGAAGTCC CACCGGAACG CGCTGGTCGA GTGGGGCGGC AAGATCACCG ACGCGGTGTC CCAGACCCCG GCCATGGGCG CGTTGCCGCA GCTCTACGCG GCCACCGCGC CGCTGGTGAC CGGCGGCGGC TACTACGGCC CCGACGGGTT CGGCGGCTTC CGGGGCCACC CGGCGCCCGC GCGGTCGACG GCGGCGGGCC GCGACGACCT CGTGGCGGCC CGGTTGTGGG ACCTGACGGC CGAGTTGACG GGCGTCGCGC CCGACCCCGC GTGA
|
Protein sequence | MAKWTEVDIP DQAGRTALVT GANSGLGLRT AEVLAAKGAR VLLACRSGER GLAAVERVSR HGEAEFVRLD LGEPASVRAA AERVQELAGD GLDLLVNNAG LMAPPLARTA DGFESQFGVN HLGHAALTWL LMPALRARAG ARVVTVSSVA HRLGGLDLAD PNFEVRRYAP WVGYGQSKLA NLLFARELDR RLARSGADVT SVAAHPGVSR TELSSTMAKS HRNALVEWGG KITDAVSQTP AMGALPQLYA ATAPLVTGGG YYGPDGFGGF RGHPAPARST AAGRDDLVAA RLWDLTAELT GVAPDPA
|
| |