| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1234 |
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| Symbol | |
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| ID | 8325411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1375026 |
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| End bp | 1376084 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644941779 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_003099032 |
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| Protein GI | 256375372 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGACCA CCGCAGTCCT GCTCGCGGCC CTGGCCGTCG CGACGGGCTG CTCCCGCGCC
GAGCGCGCCG AGGAGAGCGC GCCCGCCGCC GACCAGGGGG CCGCCGCCGA GCTGCGGCTG
GGCTACTTCC CGAACGTCAC CCACGCGTCC GCGCTGATCG GCGTGGAGCG GGGGCTGTTC
GCGAAGGAGC TGGGCTCGAC CAAGCTGACC ACGCAGACCT TCAACGCCGG GCCCGAGGCG
GTGAACGCGC TGCTGGGCGA GTCGCTGGAC GCGACGTTCA TCGGGTCCGG CCCGGCGATC
AACGCCTACG CCAAGTCCGG CGGGGAGGCG GTGAAGCTGA TCGCCGGGGC CACCTCGGGC
GGCGCGCAGC TCGTCGTCAA GCCGGAGATC ACCACCCCGC AGGACCTCAA GGGCAAGGTC
ATCACCACCC CGCAGCTGGC GAACACGCAG GACGTGGCGC TGAAGAAGTG GCTGTCCGAC
CAGGGGCTGG CCATCGGCGC GGGCCCCGAC CAGGTCAACG TCACCAACAC CGAGAACTCG
CAGAGCCTGG ACCTGTTCCG CTCCGGCGGG GTGCAGGGCG CGTGGGCCCC GGAGCCGTGG
TCGTCGCGGC TGGTGGTCGA CGCGGGCGCG AAGGTGCTGC TGGACGAGAA GACCCTGTGG
GAGGGCGGGA AGTTCCCGAC CACGGTGCTG ATCGTGCGCA CGGAGTTCCT GCAGCAGCAC
CCGGACACCG TGCGGGCGCT GCTGCGCGGG CACCTCGCCG CGACCAAGTA CGCGCGGGAC
GACGCGGCGG GCGCCAAGAC CACCGTGAAC GAGGCGCTGA AGAAGCTGAC CGGCAAGGCG
CTGGGCGAGC CGGTGCTGGA CCGGGCGTTC GAGGGCATCG AGCTGACCCT GGACCCGCAG
GCCGCGGCGT TCCCGCAGCT CGCGGAGGAC GCGGTGACGG CGGGCGTGGC CAAGGAGGCG
GCCGACGTCG CCGGGCTGGC CGACTTCGGG CCGCTGGGCG AGGTGCTGAA GGCCGCCGGT
GAGCCCGCCG TGGACGCCGC GGGCCTGGAC CGGAAGTAG
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| Protein sequence | MKTTAVLLAA LAVATGCSRA ERAEESAPAA DQGAAAELRL GYFPNVTHAS ALIGVERGLF
AKELGSTKLT TQTFNAGPEA VNALLGESLD ATFIGSGPAI NAYAKSGGEA VKLIAGATSG
GAQLVVKPEI TTPQDLKGKV ITTPQLANTQ DVALKKWLSD QGLAIGAGPD QVNVTNTENS
QSLDLFRSGG VQGAWAPEPW SSRLVVDAGA KVLLDEKTLW EGGKFPTTVL IVRTEFLQQH
PDTVRALLRG HLAATKYARD DAAGAKTTVN EALKKLTGKA LGEPVLDRAF EGIELTLDPQ
AAAFPQLAED AVTAGVAKEA ADVAGLADFG PLGEVLKAAG EPAVDAAGLD RK
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