Gene Amir_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1198 
Symbol 
ID8325375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1340880 
End bp1341326 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID644941743 
Productiojap-like protein 
Protein accessionYP_003098996 
Protein GI256375336 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGCCA CCGACGAGGC ACGACGGTTG GCGCTGGTCG CCGCGAACGC GGCGTCCGAC 
AAGAAGGCGC ACGACGTGAT CCTCCTCGAC GTGTCCGAGC AGTTGGTCAT CACCGACTGC
TTCGTGATCG CCTCCGCTCC CAACGAGCGG CAGGTCGGCG CGATCGTGGA CGGCGTCGAG
GAGAAGCTCC GCGAGGCGGG GCGCAAGCCG GTCCGCAGGG AGGGCGCCCG CGAGGGCCGC
TGGGTCCTGC TGGACTTCGT GGACGTCGTG GTGCACGTCC AGCACTCGGA GGAGCGCAGC
TTCTACGGCC TGGAGCGGCT GTGGAAGGAC TGCCCCAGGA TCGAGTTCGA CGCGGGCCCC
TCGTCCCCGG ACGAGGACGC CACCGGCGAG GACACCACCG CGAGCAGCAC CGGGGAGGCT
GCCGCCGACG AGGTCGACCG GGCATGA
 
Protein sequence
MAATDEARRL ALVAANAASD KKAHDVILLD VSEQLVITDC FVIASAPNER QVGAIVDGVE 
EKLREAGRKP VRREGAREGR WVLLDFVDVV VHVQHSEERS FYGLERLWKD CPRIEFDAGP
SSPDEDATGE DTTASSTGEA AADEVDRA