Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1184 |
Symbol | |
ID | 8325361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1323018 |
End bp | 1324721 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644941729 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003098982 |
Protein GI | 256375322 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.441887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCTGC TCCGCCGCGC CCGAGCGGCA GCGGTCAGCG CCGCGCTGCT CGCGACCGGT CTCGCCGCGG CCCCGTCCGC CTCCGCGTCG GCGCACACCG CCGACGGCGC GGGCCAGGCC GGTCCGACCG CGCCGGGGTG CGTCCAGACG GGGCGCGAGC TGCGCTACCT GGTGGTCTTC GACCGGGGCA CGAGCGAGCC GCTGGCCTCG GCCGAGGTGG GGGCCGCGTG CGGGCGGGTC GAGACGTACC ACCCGCAGAT CGCGGTGGCC GTCGCGACCT CGACCGATCC CGGTTTCGGG ACCCGGATGG GCGACGACCG GGCGTACAGC GCGCAGGCGG AGGCCACGAG CCGGACCAAG CGCAAGCCGG ACGAGACCGC GCAGCTCAAG TCCGCCGTGC CGGAGACGGG CGACCTGACG GCGCAGCAGT GGGACATGGA GCTGGTCAAC GCCGCCGCCG CGCACGCGGT GAGCACCGGC AGCCGCGACG TGGTGGTCGG CGTGCTGGAC TCGGGCGTCG ACCCGGACCA CCCCGACCTG GCCGGGGCGC TGGACCCGGC GCTGTCGGCG GGCTGCACCA GCGGCGTGGC CGACCCGGCG CGGGCGTCCT GGTCGCCGAC GACCTCGCCG CACGGCACGC ACGTGGCGGG CACGATCGCG GCGGCCGACG ACGGGCGGGG CACCACGGGC GTCGCGCCGG GGGTGCGGAT CGCGTCGGTG AAGGTCGTGG ACGACGACGG GTTCATCTAC CCGGAGTACG CGGTGTGCGG GTTCATGTGG GCCGCGGCGC GGGGCATGGC CGTCACGAAC AACAGCTACT ACATCGACCC GTGGGTGTTC ACCTGCCGGG ACCAGGGCGG CCAGTCCGTG GTGCAGGAGG CGGTGCGGCG CGCGGTGGAC TACGCGGCGG ACCGGGGCGT GCTGAGCGTG GCGGCGGCGG GCAACGAGGG CGCCGACCTG ACCAGGCCCG GTCGGGACGC GCTGAGCCCG ACGAACGCGG CGGCCAAGCC GAGGCCCGTG GACAGCTCGT GCCTGGTGCT GCCCGCGCAG CTGCGCAACG TGGTGGCGGT GTCGTCGGTG GGCTCGTCGA AGGTGAAGGC CGGGTACAGC TCGTACGGGC TGGGCGCGGT GGACCTGACC GGGCCTGGTG GGGACCGCAA GCAGCCCGCG GACGACGGCG TGCCGGGGTG CGTGCTGTCG ACGGTGCCGT CGGGCTACGA CTACTCGTGC GGCACGTCGA TGGCGGTGCC GCACGTGTCC GGGGTGGCGG CGCTGCTGGC GTCGGGGCAC CCGGAGGCCT CGCCTGCCGA GCTGACGAAG ATGCTGGGCG AGCAGGCGGA GACGCTGCCG TGCCCGGCGG ACTACGACCT GAACGGCACG GGCGCGCAGG ACGGCTACTG CACCGGGTAC TCCGAGTACA ACGGGTTCTA CGGGCACGGG CTGGTGGACG CCGAGGCTGC GGTGAAGTCG CCGCTGACCG GGGTCGGCGG GCCCGTGGGC GACGTTCCCT GGCAGACCGG GGCGGGGCAG GCCGGTTCGG GTTCGGGTTC GGGTTCGGGG CAGGGCGGGT CGGGCCAGGG TGGCTCGGGT CAGGCCGAGG CGGGCGAGTC GGGGCCGGTG CGGACCGGGG GTTCGGGCGA CCGGACCGAG GCCGGTGGCG CGGGGACCGG GAGCGGGACG GGCAAGGCCG CCACCATCGG GTGA
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Protein sequence | MPLLRRARAA AVSAALLATG LAAAPSASAS AHTADGAGQA GPTAPGCVQT GRELRYLVVF DRGTSEPLAS AEVGAACGRV ETYHPQIAVA VATSTDPGFG TRMGDDRAYS AQAEATSRTK RKPDETAQLK SAVPETGDLT AQQWDMELVN AAAAHAVSTG SRDVVVGVLD SGVDPDHPDL AGALDPALSA GCTSGVADPA RASWSPTTSP HGTHVAGTIA AADDGRGTTG VAPGVRIASV KVVDDDGFIY PEYAVCGFMW AAARGMAVTN NSYYIDPWVF TCRDQGGQSV VQEAVRRAVD YAADRGVLSV AAAGNEGADL TRPGRDALSP TNAAAKPRPV DSSCLVLPAQ LRNVVAVSSV GSSKVKAGYS SYGLGAVDLT GPGGDRKQPA DDGVPGCVLS TVPSGYDYSC GTSMAVPHVS GVAALLASGH PEASPAELTK MLGEQAETLP CPADYDLNGT GAQDGYCTGY SEYNGFYGHG LVDAEAAVKS PLTGVGGPVG DVPWQTGAGQ AGSGSGSGSG QGGSGQGGSG QAEAGESGPV RTGGSGDRTE AGGAGTGSGT GKAATIG
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