Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1173 |
Symbol | |
ID | 8325350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1310810 |
End bp | 1311730 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644941720 |
Product | ABC transporter related |
Protein accession | YP_003098973 |
Protein GI | 256375313 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACAC CCCTCGTAGA GGCCAGCGGG CTGACCAAGC GCTTCGGGGA GTTCGAGGCG GTCAGGGGCA TCGACGTCCG GGTCGAGCGC GGCGAGGCCT TCGGGTTCCT CGGGCCCAAC GGCGCGGGCA AGTCCTCGAC CATGCGGATG ATCTCCTGCA CCTCCCCGCG CTCCGGCGGC GACCTGCGCG TGCTCGGCAT GGACCCGGAC CGGGACGGCC CGCGCATCCG GGCCCGCATC GGGGTGGTGC CGCAGCAGGA CACCCTCGAC AACGAGCTGA CCGTGCGGCA GAACCTGGAG GTGTACGGCC GCTACTTCGG GCTCTCCCGC GCCGCCGTGC GCGCCAAGGC GGTCGAGCTG CTGGAGTTCG CCCAGCTCAC CGAGCGCGCG AGCAGCGAGG TCGAACCGCT GTCCGGCGGC ATGAAGCGGC GGCTCACCAT CGCGCGCTCG CTGGTCAACG AGCCCGAGGT GCTGCTGCTC GACGAGCCCA CCACCGGCCT GGACCCGCAG GCCCGCCACC TGCTGTGGGA CCGGCTGTTC CGGCTCAAGG CCGAGGGCGT CACGCTGATC ATCACCACGC ACTACATGGA CGAGGCCGAG CAGCTGTGCG ACCGGCTCGT GGTGATGGAC GGCGGGCGCG TCGCCGCCGA GGGCTCGCCG GCCGAGCTGA TCTCCCGCTA CTCCACCCGC GAGGTCCTGG AGCTGCGCTT CCCGCCCGGC CACCAGTCCG CCGACCGGCT GGAGGACCTC GCCGAACGGG TGGAGGTGCT CCCCGACCGG GTGCTCCTGT ACACCCGCGA CGGCGAGGCC GCGCTCGCCG CCGCCCAGGA GCGCGGGGTG CGCCCGGTGT CGAGCCTGGT GCGCCGCTCC AGCCTGGAGG ACGTGTTCCT CCGGCTCACC GGCCGGACGC TGGTCGACTG A
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Protein sequence | MTTPLVEASG LTKRFGEFEA VRGIDVRVER GEAFGFLGPN GAGKSSTMRM ISCTSPRSGG DLRVLGMDPD RDGPRIRARI GVVPQQDTLD NELTVRQNLE VYGRYFGLSR AAVRAKAVEL LEFAQLTERA SSEVEPLSGG MKRRLTIARS LVNEPEVLLL DEPTTGLDPQ ARHLLWDRLF RLKAEGVTLI ITTHYMDEAE QLCDRLVVMD GGRVAAEGSP AELISRYSTR EVLELRFPPG HQSADRLEDL AERVEVLPDR VLLYTRDGEA ALAAAQERGV RPVSSLVRRS SLEDVFLRLT GRTLVD
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