Gene Amir_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1173 
Symbol 
ID8325350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1310810 
End bp1311730 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content73% 
IMG OID644941720 
ProductABC transporter related 
Protein accessionYP_003098973 
Protein GI256375313 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01288] ATP-binding ABC transporter family nodulation protein NodI 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACAC CCCTCGTAGA GGCCAGCGGG CTGACCAAGC GCTTCGGGGA GTTCGAGGCG 
GTCAGGGGCA TCGACGTCCG GGTCGAGCGC GGCGAGGCCT TCGGGTTCCT CGGGCCCAAC
GGCGCGGGCA AGTCCTCGAC CATGCGGATG ATCTCCTGCA CCTCCCCGCG CTCCGGCGGC
GACCTGCGCG TGCTCGGCAT GGACCCGGAC CGGGACGGCC CGCGCATCCG GGCCCGCATC
GGGGTGGTGC CGCAGCAGGA CACCCTCGAC AACGAGCTGA CCGTGCGGCA GAACCTGGAG
GTGTACGGCC GCTACTTCGG GCTCTCCCGC GCCGCCGTGC GCGCCAAGGC GGTCGAGCTG
CTGGAGTTCG CCCAGCTCAC CGAGCGCGCG AGCAGCGAGG TCGAACCGCT GTCCGGCGGC
ATGAAGCGGC GGCTCACCAT CGCGCGCTCG CTGGTCAACG AGCCCGAGGT GCTGCTGCTC
GACGAGCCCA CCACCGGCCT GGACCCGCAG GCCCGCCACC TGCTGTGGGA CCGGCTGTTC
CGGCTCAAGG CCGAGGGCGT CACGCTGATC ATCACCACGC ACTACATGGA CGAGGCCGAG
CAGCTGTGCG ACCGGCTCGT GGTGATGGAC GGCGGGCGCG TCGCCGCCGA GGGCTCGCCG
GCCGAGCTGA TCTCCCGCTA CTCCACCCGC GAGGTCCTGG AGCTGCGCTT CCCGCCCGGC
CACCAGTCCG CCGACCGGCT GGAGGACCTC GCCGAACGGG TGGAGGTGCT CCCCGACCGG
GTGCTCCTGT ACACCCGCGA CGGCGAGGCC GCGCTCGCCG CCGCCCAGGA GCGCGGGGTG
CGCCCGGTGT CGAGCCTGGT GCGCCGCTCC AGCCTGGAGG ACGTGTTCCT CCGGCTCACC
GGCCGGACGC TGGTCGACTG A
 
Protein sequence
MTTPLVEASG LTKRFGEFEA VRGIDVRVER GEAFGFLGPN GAGKSSTMRM ISCTSPRSGG 
DLRVLGMDPD RDGPRIRARI GVVPQQDTLD NELTVRQNLE VYGRYFGLSR AAVRAKAVEL
LEFAQLTERA SSEVEPLSGG MKRRLTIARS LVNEPEVLLL DEPTTGLDPQ ARHLLWDRLF
RLKAEGVTLI ITTHYMDEAE QLCDRLVVMD GGRVAAEGSP AELISRYSTR EVLELRFPPG
HQSADRLEDL AERVEVLPDR VLLYTRDGEA ALAAAQERGV RPVSSLVRRS SLEDVFLRLT
GRTLVD