| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1142 |
|---|
| Symbol | |
|---|
| ID | 8325317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1270865 |
|---|
| End bp | 1273423 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644941688 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_003098943 |
|---|
| Protein GI | 256375283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.929946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCAC CCAACCTCAC CCGCGACGAG GCGCAGCAGC GCGCCGGACT GCTGGAAGTC
GACTCCTACC GGATCGAGCT GGACCTGACC GACGGAGGCG GCAAGCCGGG TTCGGAGACG
TTCCGCTCGA CCACGGCGGT GACCTTCCGC AGCCGCGAGG CGGGTGCCTC CACCCGCATC
GACCTCGTGG CCGCCTCGGT GCGCCGCGCG GTGCTCAACG GCGTCGAGCT CGACGTCTCC
GGCTACCGCG AGGAGGACGG CATCGCGCTG CCCGACCTCG CCGAGACCAA CGAGCTCCTG
GTCGAGGCCG ACTGCCGGTA CATGAACACC GGTGAGGGCC TGCACCGGTT CGTCGACCCG
GTCGACGGCG AGGTCTACCT GTACTCGCAG TTCGAGACGG CCGACGCGAA GCGCATGTTC
ACCTGCTTCG ACCAGCCGGA CCTCAAGGCC GTCTACGACA TCACCGTGCA GGCACCCGCG
CACTGGAAGG TGGTGTCCAA CGCGGCGATC GAGTCCACCT CGGAGGGCGA GGGCGGCACC
GCCAAGCACG TCTTCGGCAC CACGAAGCCC ATGTCCACCT ACCTGGTGGC GATGGTCGCC
GGACCGTACG CCGAGTGGCG CGACGAGTTC ACCGACGGCG AGACCACGAT CCCCCTCGGC
ATCTACTGCC GCGCCTCGCT GGCCGCGCAC ATGGACCACG AGCGGCTGTT CACCGAGACC
AAGCAGGGCT TCGGGTTCTT CCACGAGGCG TTCGGCGTGA AGTACCCGTT CGGGAAGTAC
GACCAGTGCT TCGTGCCGGA GTTCAACGCG GGCGCGATGG AGAACGCGGG CTGCGTCACC
TTCCTGGAGG ACTACGTCTT CCGCAGCCGG GTGACGCGCT ACCTGTACGA GCGCCGCGCC
GAGACCGTGC TGCACGAGAT GGCGCACATG TGGTTCGGCG ACCTGGTCAC CATGCGCTGG
TGGGACGACC TGTGGCTGAA CGAGTCGTTC GCCACCTGGG CGTCGGTGCT CGCGCAGGCG
GGCGCGACCG AGTACAAGCA CGCCTGGACC ACGTTCGCGA AGATCGAGAA GTCCTGGGCG
TACCGGCAGG ACCAGCTCCC GTCCACGCAC CCGGTGGCCG CGGACATCCC GGACGTGCAG
GCGGTCGAGG TCAACTTCGA CGGCATCACG TACGCCAAGG GCGCCTCGGT GCTCAAGCAG
CTGGTGGCGT ACGTGGGCCT GGAGAACTTC CTGGCGGGCC TGCGGGTCTA CTTCGCCAAG
CACTCGTGGG GCAACGCCAC GCTGGCCGAC CTGCTGGGCG CGCTGGAGGA GGCCTCCGGC
CGCGACCTGT CGTGGTGGAG CGCGCAGTGG CTGGAGACCA CCGGCCTGAA CCTGCTGCGC
CCCAAGTACT CCGTGGACGC CGAGGGCCGG TTCACCGAGT TCTCCGTCGT GCAGGGCGGG
GCGCGGCCGG GCGCGGGCGA GCTGCGCACG CACCGGCTGG CCGTCGGCGT GTACGACGAG
GAGGACGGCA AGCTGGTGCG CAAGCACCGG GTCGAGCTGG ACGTGTCCGG CGAGAGCACG
GACGTGCCCG AGCTGGTCGG CGTGCACCGG GGCAAGCTGG TGCTGGTCAA CGACGACGAC
CTCACCTACT GCACGATGCG GCTGGACCCG GACTCGCTGG CGACGCTGGT CGACCGGATC
TCCGACATCG CCGAGCCGCT GCCGCGCACC CTGTGCTGGT CGGCCGCGTG GGAGATGACC
CGCGAGGCCG AGCTGAAGGC CCGCGACTTC GTGAACCTGG TGCTGGGCGG GCTGGGCTCG
GAGTCCGAGG TGGGCGTGGT GCAGCGGCTG CTGCTCCAGG CGCAGACCGC GCTGTCGTCC
TACGCGGACG CGTCGTGGCG CGCGGAGGGC TGGTCGCGGT TCACCGCCAC CACCCTGGAC
CTGGCGCGGA GCGCGGAGCC GGGCTCGGAC CACCAGCTGG CGTTCGTCAA CGCGCTCACC
GGGTCGGTGC TGGGCGAGGA GGCCGTGTCG GTGCTGAAGG GCTGGCTGGA CGGCTCCGCG
CCGCTGGCCG GGCTCGACGT GGACACCGAC CTGCGGTGGC GGCTGCTCCA GGCGCTGGTG
GCGCACGGCG CGGCCGGGGC CGAGGAGATC GCGGCCGAGG AGGAGCGCGA CCCCACCTCG
ACCGGGCACC GGCGGGCGCA GTCGGCGCGC GCGATGCGGC CGACGGTGGA GGCGAAGGAC
GAGGCCTGGG ACCGGGCGGT GCACGACGAC GCGCTGCCGA ACGCGGTGAG CGAGGCGATC
GTGTTCGGCA TCCAGCACCC GGCGCAGAAG GAGCTGCTGG CGCCGTACGC GGCCCGGTAC
TTCCAGGACG TGGCGGACGT GTGGGAGCGG CGGTCCAGCG AGCGGGCGCA GTCCGTGGTC
GTGGGGCTGT ACCCGTCGTG GTCGATCACG CCGGAGACGG TGGCGGCCTC GGACGAGTGG
CTGGCCCAGG AGCGCCCGCC CGCGCTGCGG CGCCTGGTGT CGGAGGGTCG CGCCGGGATC
GTGCGCGCCC TGGCGGCGCA GGAGTTCGAC AGGTCGTAA
|
|---|
| Protein sequence | MAAPNLTRDE AQQRAGLLEV DSYRIELDLT DGGGKPGSET FRSTTAVTFR SREAGASTRI
DLVAASVRRA VLNGVELDVS GYREEDGIAL PDLAETNELL VEADCRYMNT GEGLHRFVDP
VDGEVYLYSQ FETADAKRMF TCFDQPDLKA VYDITVQAPA HWKVVSNAAI ESTSEGEGGT
AKHVFGTTKP MSTYLVAMVA GPYAEWRDEF TDGETTIPLG IYCRASLAAH MDHERLFTET
KQGFGFFHEA FGVKYPFGKY DQCFVPEFNA GAMENAGCVT FLEDYVFRSR VTRYLYERRA
ETVLHEMAHM WFGDLVTMRW WDDLWLNESF ATWASVLAQA GATEYKHAWT TFAKIEKSWA
YRQDQLPSTH PVAADIPDVQ AVEVNFDGIT YAKGASVLKQ LVAYVGLENF LAGLRVYFAK
HSWGNATLAD LLGALEEASG RDLSWWSAQW LETTGLNLLR PKYSVDAEGR FTEFSVVQGG
ARPGAGELRT HRLAVGVYDE EDGKLVRKHR VELDVSGEST DVPELVGVHR GKLVLVNDDD
LTYCTMRLDP DSLATLVDRI SDIAEPLPRT LCWSAAWEMT REAELKARDF VNLVLGGLGS
ESEVGVVQRL LLQAQTALSS YADASWRAEG WSRFTATTLD LARSAEPGSD HQLAFVNALT
GSVLGEEAVS VLKGWLDGSA PLAGLDVDTD LRWRLLQALV AHGAAGAEEI AAEEERDPTS
TGHRRAQSAR AMRPTVEAKD EAWDRAVHDD ALPNAVSEAI VFGIQHPAQK ELLAPYAARY
FQDVADVWER RSSERAQSVV VGLYPSWSIT PETVAASDEW LAQERPPALR RLVSEGRAGI
VRALAAQEFD RS
|
|---|
| |