Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1136 |
Symbol | |
ID | 8325311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1265196 |
End bp | 1266173 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941682 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003098937 |
Protein GI | 256375277 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGTCG TGGACGACGT GAAGTCGACG TTGGCCGTGG ACTGGTGGGT GGAGAACGGC CCGAAGCTCG CCGAGGGCGC GATCCGGATC ACGCTCACGG TGCTGATCGC CGTGATCGTC CGGTTCCTGC TGCGGCGGCT GATCGACCGG CTCACCGTGG GCGGCGCCGA GAAGGGCCGC AGGCCCCGGC TGCTGCGCCC GCTGCGCGAG CGGGCCCCGC AGGCGCTGAG CGCCCTGGTG TCCGAGCGCC GCGAGCAGCG CGCCCGCACC ATCGGCTCGG TCCTCAAGTC CGTCGTCACG ATGGTCGTGT TCGGCGTGGC GTTCATCCAG GTGCTCACCG AGCTGGGCAT GAACGTCGCG CCGATCCTGA CCTCCGCGGG CATCCTGGGC GTCGCGATCG GCTTCGGCGC CCAGAACCTG GTGAAGGACT TCCTGTCCGG CATGTTCATG ATGCTGGAGG ACCAGTACGG CGTGGGCGAC GTGGTCGACC TCGGCCCGGC CACCGGCACG GTGGAGAGCG TGGGCCTGCG GATCACCACG ATCCGGGACA CCAACGGCAC CGTCTGGTAC GTGCGCAACG GCGAGATCCT GCGGGTGGGC AACTCCTCGC AGGGCTTCGC CGTGGCGGTG GTGGACCTGC CGCTGGCGTA CGGCGCGAAC CTGGCCGACG TCACCGAGAT CCTGGCCAAG GCCGCGGCCG AGGCGACCGA GTCCGAGCCG CTGTCGAACG ACGTGATCGC GAAGCCGGAC GTGCTCGGCG TGGAGAAGGT CACCCCCGAG GGCCTGACCA TCCGGGTGAC GACGAAGGTG CGCCCCGGCC GCCAGTGGGC GGTGCAGCGG GCGCTGCGGG CGAAGCTGAT GCACGCGCTG GAGGACCAGG GCATCTCGCT GAGCCCGGCC GCCGCGACGG CCCCCTCGGT GACGCCCGCC CCGCCCGGCA ACTACGGCAC GCCGACCCCC GTGGTCAAGA AGTCCTGA
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Protein sequence | MEVVDDVKST LAVDWWVENG PKLAEGAIRI TLTVLIAVIV RFLLRRLIDR LTVGGAEKGR RPRLLRPLRE RAPQALSALV SERREQRART IGSVLKSVVT MVVFGVAFIQ VLTELGMNVA PILTSAGILG VAIGFGAQNL VKDFLSGMFM MLEDQYGVGD VVDLGPATGT VESVGLRITT IRDTNGTVWY VRNGEILRVG NSSQGFAVAV VDLPLAYGAN LADVTEILAK AAAEATESEP LSNDVIAKPD VLGVEKVTPE GLTIRVTTKV RPGRQWAVQR ALRAKLMHAL EDQGISLSPA AATAPSVTPA PPGNYGTPTP VVKKS
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