Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1108 |
Symbol | |
ID | 8325282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1230943 |
End bp | 1231323 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941654 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003098910 |
Protein GI | 256375250 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.645052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGG CAACGCCCAA CGCGCACCCG TACCAGCAGG TGGCGGGGGA CTTGGCCGCC AAGATCACCG GCGGCGCCCT GGCACCGGGA GAACGGTTGC CCAGCGTGCG CGCCCTGGCC GAGGAGTACG GCACCACCAA CGCGACGATC CAGCGGACGC TTGCCCTGCT GGCCGAGCAG GGCTTGGTGG ACCGCGTCCC CAACGTCGGC CTCTTCGTGC GGGACCCGCA GTCACCAACG GCCCGGACCG CCACGGTGGA GGACGTCATG CGCGCCCTGA CCGAGGTTCA GGAGGCTCTG GCCGACCTGG GTCAGCGGGT CGCCCGTCTC GAGGAGGTCG CCGACGTTCC AACCGGTCAA CCCGCTCACC GATCCGGTTG A
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Protein sequence | MDQATPNAHP YQQVAGDLAA KITGGALAPG ERLPSVRALA EEYGTTNATI QRTLALLAEQ GLVDRVPNVG LFVRDPQSPT ARTATVEDVM RALTEVQEAL ADLGQRVARL EEVADVPTGQ PAHRSG
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