Gene Amir_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1108 
Symbol 
ID8325282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1230943 
End bp1231323 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content71% 
IMG OID644941654 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003098910 
Protein GI256375250 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.645052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAGG CAACGCCCAA CGCGCACCCG TACCAGCAGG TGGCGGGGGA CTTGGCCGCC 
AAGATCACCG GCGGCGCCCT GGCACCGGGA GAACGGTTGC CCAGCGTGCG CGCCCTGGCC
GAGGAGTACG GCACCACCAA CGCGACGATC CAGCGGACGC TTGCCCTGCT GGCCGAGCAG
GGCTTGGTGG ACCGCGTCCC CAACGTCGGC CTCTTCGTGC GGGACCCGCA GTCACCAACG
GCCCGGACCG CCACGGTGGA GGACGTCATG CGCGCCCTGA CCGAGGTTCA GGAGGCTCTG
GCCGACCTGG GTCAGCGGGT CGCCCGTCTC GAGGAGGTCG CCGACGTTCC AACCGGTCAA
CCCGCTCACC GATCCGGTTG A
 
Protein sequence
MDQATPNAHP YQQVAGDLAA KITGGALAPG ERLPSVRALA EEYGTTNATI QRTLALLAEQ 
GLVDRVPNVG LFVRDPQSPT ARTATVEDVM RALTEVQEAL ADLGQRVARL EEVADVPTGQ
PAHRSG