Gene Amir_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1083 
Symbol 
ID8325257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1204900 
End bp1206438 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content77% 
IMG OID644941629 
Productputative transcriptional regulator, PucR family 
Protein accessionYP_003098885 
Protein GI256375225 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC GCCAGGTGCT GATGGCCTTG GGCGAGGAGC TGGTGGAGGT GCGGGCCGCG 
CCGCGCGGGC TGGAGGCGGA CGTCCGCGAC ATCGTCATCC TCGACCCGGA CGACGTGCCG
GACGTGCGGC CCGGCGACCT CGCGCTGGTC ATCGGCGCGC GCGGCCGGGC AGCGTTGCCG
CTGGTCAGGG CGGCCGGGGC CGGGGGCGCG TCGGCGGTGG CGGTCAAGCT CGACCGGCCG
ACCCCGCAGC TGGGACAGGC CGCCGCCGAC GCGGGCGTCG CGCTGCTCGC GGTGCGGCCC
GAGGTGCGCT GGGAGCACCT GGAGTCGCTG GCCAGGGCCG TGGTGCGCAG TACGCGGCTG
GCCGCCGACG CGGGGTCGGG CGAGGTGGCG GGCGACCTGT TCGGGCTGGC CCAGACGATC
GCGGCGCTGA CCGGCGGCGT CGTCAGCATC GAGGACACCG CCAGCCGCGT GCTCGCCTAC
TCGCGCTCCA CCGACGACGT GGACGAGCTG CGCAGGCTGT CCATCCTGGG CAGGCAGGGG
CCGGAGCCGT ACCTGGCGAT GCTCCGCGAC TGGGGCGTCT ACCAGCGGCT CCGCGCGGGC
GAGGAGGTCG TGCGGGTGGA CGAGCGGCCC GACCTGGGCA TCCGGCGGCG GCTCGCGGTG
GGCGTCCTGG CGGGCGATCA GCCGCTCGGC TCGATCTGGG TGCAGGAGGG CGCCACCCCG
CTCACCGAGC AGGCCGAACG CGCCCTCGTC GGCGCCGCCC GCGTCACCGC GCTGCACCTG
GTGCGCCTGC GCGAGCCCCG CTCGGCGTTC CGGGAGAACC TGCTGACCTC CCTGCTGGAC
GGCCGCACCG ACGCCGCCTC GGTCGCGGGC CAGATCGGCG CGGACCCGGC GAGACCGGCC
GCGGTCGTGG TGTTCGCGCT GCGCGGCGAC GCGGGCGACC GCACCGAGGG CGAGCTGCGC
AGGGCCGAGG TGACCGGGCT GATCTCGGTG CACGCCGCCG CGTACCGGCG CAGCGCCCTG
GTCAGCCGCA GCGGCGGCCG GACCTACGCC CTGCTGCCCG ACCTCCAGCC CGGCGCGGCG
CTGCTGCCGC TCACCCGCGA GATCGTCGCG GCGGCCCGCA AGCACACCGG GCTGGTGGTG
CAGGCGGCGA TCGGCGGAGA GGTCCCGACC CTGGACGAGG TCGCGGTGTC CAGGGGCGAG
GCGGACCGGG TGCTCGACGC GATGGCCCGC GACCTGGACG CCCAGGTCGC GACCCTGGCG
GACGTGCGGT CGCGGGTGCT GGTCAGCGAG GTCCTGGCGC TGCTGGCGGA GCACCCGCGG
GTGCGCGACC CCCGGCTGGA GGCGCTGGAC CCGGAGCTGG CCCGGTCGCT GCTGGTGTAC
CTGGACGCGT TCGGGGACGT GCGGTCGGCG GCGGCGGAGC TGCACGTGCA CCCGAACACG
CTGCGGTACC GGGTGCGGCG GGCGGGCGAG CTGACCGGGG TGGACCTGGG TGATCCGCTG
GTCCGGCTGT TCGCGCAGCT CCAGCTCAGG CTGCGGTGA
 
Protein sequence
MSLRQVLMAL GEELVEVRAA PRGLEADVRD IVILDPDDVP DVRPGDLALV IGARGRAALP 
LVRAAGAGGA SAVAVKLDRP TPQLGQAAAD AGVALLAVRP EVRWEHLESL ARAVVRSTRL
AADAGSGEVA GDLFGLAQTI AALTGGVVSI EDTASRVLAY SRSTDDVDEL RRLSILGRQG
PEPYLAMLRD WGVYQRLRAG EEVVRVDERP DLGIRRRLAV GVLAGDQPLG SIWVQEGATP
LTEQAERALV GAARVTALHL VRLREPRSAF RENLLTSLLD GRTDAASVAG QIGADPARPA
AVVVFALRGD AGDRTEGELR RAEVTGLISV HAAAYRRSAL VSRSGGRTYA LLPDLQPGAA
LLPLTREIVA AARKHTGLVV QAAIGGEVPT LDEVAVSRGE ADRVLDAMAR DLDAQVATLA
DVRSRVLVSE VLALLAEHPR VRDPRLEALD PELARSLLVY LDAFGDVRSA AAELHVHPNT
LRYRVRRAGE LTGVDLGDPL VRLFAQLQLR LR