Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1076 |
Symbol | |
ID | 8325250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1194739 |
End bp | 1195434 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 644941622 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003098878 |
Protein GI | 256375218 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACGCG TGTACCGGGA GAGGCGGGCG CACTCGGGTC TGCGCTGCGT GTGGCGGCGC GAGGTCGACG CGGGCGCGGT GGACGGCGAG GTGCGGGTCG TGCCGGACGG CTGCACGGAC CTGCTGTTCT CCCCCGGCGA CGGCAGGCTG TTCGTCGCCG GGCCGGACAC GCGCGCGCAC CTGAGCGCCG AGTCGGGCGC GCTGCACGCG GTGCGCTTCC CGCCCGGCGT CGGGCCGTCG GTGTTCGGGG TTCCCGGCGT CGAGCTCCGC GACCGGCGGG TGCCGCTGGA CGCGCTGTGG GGCCCGGTCG ACGCCCTGCT CGACCGGCTG CTGACCGCCG CCGACCCCGA GGTGGTGCTG GCGCGGGAGT CGGTGCGGCG GCTGCGCGAG TCCCCGCCGG ACCCGGTGGC GCGGGTGATC GCGGCGACCG TGGCGCGACC GGGCGGGGTG GCGGGGCTCG CGGACGGGAT CGGGCTCAGC GAGCGGCAGC TGCGGCGGCG CAGCGCGGCG GCGTTCGGGT ACGGGCCGAA GGTGCTGCAG CGGGTGCTGC GGTTCGACCG GGCGGTGGCG CTGGCGCGCG CCGGGACCGG GTTCGCGGAG ACCGCGGCGC GCACCGGGTA CGCCGACCAG GCGCACCTGT CGCGCGAGGT GCGGGAGCTG GCCGGGGTGC CCCTGGGGGT GCTGGTCGGG CGGTGA
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Protein sequence | MGRVYRERRA HSGLRCVWRR EVDAGAVDGE VRVVPDGCTD LLFSPGDGRL FVAGPDTRAH LSAESGALHA VRFPPGVGPS VFGVPGVELR DRRVPLDALW GPVDALLDRL LTAADPEVVL ARESVRRLRE SPPDPVARVI AATVARPGGV AGLADGIGLS ERQLRRRSAA AFGYGPKVLQ RVLRFDRAVA LARAGTGFAE TAARTGYADQ AHLSREVREL AGVPLGVLVG R
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