Gene Amir_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1068 
Symbol 
ID8325242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1185734 
End bp1186228 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content73% 
IMG OID644941614 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003098870 
Protein GI256375210 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.388349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGTAC CATCCACGGG TATGGACCTC ACCGCGCCCC AGACCGACAG CCGCGGCGAA 
GACCTGAACT GGCTGCTGCA CCGCGCCGCC CAGAAGCTGA ACGCGACCGC GCAGGAGGTC 
GCCGTCAAGC ACGGCGTCAG CACCCGCGGT CAGGTCATCC TCACGGCGCT CGTGAGCCAC 
AGCTGCACCC GCACCCAGCT CTCGCTCGGC CACATGCTCG GCCTGGACAA GACGACGCTG 
ACCGCCGAGC TCGACCGCCT GGAGCGGGCG GGCCTGGTCG AGCGCAAGCC GGACCCCAAC 
GACCGCCGCG TGCGCACGCC CTCGATCACC GAGCAGGGGC GCGCCGTGCA GCGGGACGTC 
GCGGTGGCGC ACGGGGCGGT CGAGGCGGAG TTCATGGCCG ACCTGAGCCC GGTCGAGGCG 
GCCCTGCTCA AGGCGCTGCT GCACCGGCTG ATCAGCGCCG AGCGGGGCAC CCCGGACAGC 
GGCTCCTGCC TCTGA
 
Protein sequence
MGVPSTGMDL TAPQTDSRGE DLNWLLHRAA QKLNATAQEV AVKHGVSTRG QVILTALVSH 
SCTRTQLSLG HMLGLDKTTL TAELDRLERA GLVERKPDPN DRRVRTPSIT EQGRAVQRDV 
AVAHGAVEAE FMADLSPVEA ALLKALLHRL ISAERGTPDS GSCL