Gene Amir_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1016 
Symbol 
ID8325187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1128531 
End bp1129343 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content75% 
IMG OID644941559 
Productbeta-lactamase domain protein 
Protein accessionYP_003098818 
Protein GI256375158 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTGA CCGTGCTCGG CTGCTCCGGC AGCCTCCCCG GCCCCGAGTC CCCGTCGTCC 
GGCTACCTGG TCGAGTCCGG GGGGTGCGCC GTCGCCCTCG ACCTGGGCAG CGGGGTGCTC
GCCGCGATGC AGGCGCGCGA GTGCGACCCG TTCGACCTCG GCGCGCTCCT GCTGTCGCAC
CTGCACCCCG ACCACTGCGC CGACTTCACC ACCCTGGCCG TCATGCGGCG CTACCACATA
CACCCGCCGT ACGACGCCTA CCAGCGCAAG CTCCCGGTGC ACGGGCCGAG CGAGGTCGCC
GACCGGCTCG CCCGCGCGTA CGCGGAGAGC GCCGAGGAAC TGGCGACCAC GGACCTGTCC
GACGTGTTCG ACTTCCACGT CCTGGACGCC GGGTCCTTCG AGGTGGGGCC GTTCCGGGTG
CGCTCCCGGC CGGTCGAGCA CTCCTGCGAG GCGCACGGCT TCCGGCTGGA GGCGGACGGC
GCGGCGATCG CCTACACGGG GGACAGCGGG CCGTGCGCCG CGCTCGCCGA CCTGGCGTCC
GGCGTCGACC TGCTGCTCGC CGAGGCCACC TGGACCGACC ACCCCGACCG GCCCCTCGGC
GAGCACCTGT CCGGGGCCCA GGCGGGTCGG CTCGCGCACG AGGCGGGCGT CGGGGAGCTG
GTGCTCACCC ACCTCGCCCC GTGGACCGAC CCGGCCGAGG TGCTGGCCGA GGCGCGCGCC
GAGTACTCCG GTCCGGTGAC GCTGGCCCGC GCGGGTGGGG TCCACGAGGT TGCCGGACCG
GCGGCACGGG TAGTAGGTGG CCGTGGCAAC TGA
 
Protein sequence
MLLTVLGCSG SLPGPESPSS GYLVESGGCA VALDLGSGVL AAMQARECDP FDLGALLLSH 
LHPDHCADFT TLAVMRRYHI HPPYDAYQRK LPVHGPSEVA DRLARAYAES AEELATTDLS
DVFDFHVLDA GSFEVGPFRV RSRPVEHSCE AHGFRLEADG AAIAYTGDSG PCAALADLAS
GVDLLLAEAT WTDHPDRPLG EHLSGAQAGR LAHEAGVGEL VLTHLAPWTD PAEVLAEARA
EYSGPVTLAR AGGVHEVAGP AARVVGGRGN