| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0994 |
|---|
| Symbol | |
|---|
| ID | 8325165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1109105 |
|---|
| End bp | 1110517 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644941537 |
|---|
| Product | Phospholipase D |
|---|
| Protein accession | YP_003098796 |
|---|
| Protein GI | 256375136 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTCT TGGACGTGCT CGACGAGCGG CTCGGCGACG GACTGGAGCG GGCTGTGCTG
GCACACCACC GGCGCAGGCT CGGCAAGCTC GGGTGGGCGA GCGTGCTCGG CGGCGACGCC
GGTTCGTGGA GCCCGCACCG CCAGGTCAGG GACGGCAACC TGGTGCGGGT GCTCATCGAC
GGGCGCGAGG GGCTGCCCGA GATCGACGCG GCCATCCGCG CCGCGCGCTC GCACGTCCAC
ATCGCCAACT GGCACGCCAG CGCCGACTTC CGGCTCACCC GCGAACCCGG CTCGCCCCCG
CTGCGCGACC TGCTCGCCGA CGTCGCCGAG CGGGTCGACG TGCGGATGCT CGTGTGGGGC
GGCCCGCCCG TGCCGCTGTT CGAGCCGACC CGCAAGCGCA CCCGGCGGTC CACCGCCGAG
TTCGAGCGGG ACAGCCGGGT GCGCTGCCTG CTCGACACGC GCGAGCGCAC CCTGCACTGC
CACCACGAGA AGATCGTGGT CGTGGACGAC GAGGTCGCCT TCGTCGGCGG CCTGGACTTC
ACCGCGCTCG ACGGCGACCG GCACGACACC ACCGACCACC CGCCGCGCGA GCCCGTGGGG
TGGCACGACC TCGCCGCCCG GATCGAGGGG CCCGCCGTCG CCGACGTCGC CGAGCACTTC
CGGCAGCGCT GGCAGGAGAT CGCCCGCGAG GAGCTGCCCG AGCCGCGCGT GCCCGCCGCG
AAGGGCGGCG CCAGCGTGCA GATCGCGCGC ACCGTGCCCG AGCGCACCTA CGACTTCGCC
CCGCGCGGCG ACTTCAGCCT CGCCGACGCC TACCTGCGCG GCCTGCGCTC CGCCGAGCGG
CTCGTCTACC TGGAGAACCA GTTCCTCTGG TCGCCCGAGG TCGTCGAGAT CCTCATCGAC
AAGCTGCGCA CCCCGCCCGA CCCGCGCTTC CGCGTCGTGC TCGTGCTGCC CCGCAAGCCC
AGCAACGGCG CCGACACCAC GCGCGGCCAG CTCGGCAGGC TCCTGGACGC CGACGACGGC
AACGGCCGCC TGGTCGCCGC CACGCTCGCC GCCCACGACG GCAGCCCGGT CTACGTGCAC
GCCAAGCTGG CGATCGTGGA CGACCGCTGG CTCACCCTCG GCTCGGCCAA CCTCAACGAG
CACTCGCTGT TCAACGACAC CGAGGTCAAC CTCGTCACCG ACGACCCGGA CCTGGCCCGC
GACACCCGGC TGCGGCTGTG GGCCGAGCAC CTCGGGCTGG CCGAGTCCGA GGTGGACGGA
CCGCCCGACG AGGTCGTGGA CCGGCTCTGG CGCGCCGCGC TCGACCACGA CGCGGGCCGC
GCGGGCGAGC ACCGCGCGGT GCGCCTGCCC GGCGTGTCCC GCCGCTCCGA ACGACTCCAG
GGACCGCTGC GCGGACTGCT CGTCGACGGC TGA
|
|---|
| Protein sequence | MGLLDVLDER LGDGLERAVL AHHRRRLGKL GWASVLGGDA GSWSPHRQVR DGNLVRVLID
GREGLPEIDA AIRAARSHVH IANWHASADF RLTREPGSPP LRDLLADVAE RVDVRMLVWG
GPPVPLFEPT RKRTRRSTAE FERDSRVRCL LDTRERTLHC HHEKIVVVDD EVAFVGGLDF
TALDGDRHDT TDHPPREPVG WHDLAARIEG PAVADVAEHF RQRWQEIARE ELPEPRVPAA
KGGASVQIAR TVPERTYDFA PRGDFSLADA YLRGLRSAER LVYLENQFLW SPEVVEILID
KLRTPPDPRF RVVLVLPRKP SNGADTTRGQ LGRLLDADDG NGRLVAATLA AHDGSPVYVH
AKLAIVDDRW LTLGSANLNE HSLFNDTEVN LVTDDPDLAR DTRLRLWAEH LGLAESEVDG
PPDEVVDRLW RAALDHDAGR AGEHRAVRLP GVSRRSERLQ GPLRGLLVDG
|
|---|
| |