Gene Amir_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0870 
Symbol 
ID8325033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp961174 
End bp962343 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content77% 
IMG OID644941412 
Producthypothetical protein 
Protein accessionYP_003098677 
Protein GI256375017 
COG category 
COG ID 
TIGRFAM ID[TIGR02678] conserved hypothetical protein TIGR02678 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.536869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACG ACCTCTCCGA GATCGACTCC GCGATCGTGG TGCGCTGCGC GCGCACCCTG 
CTGCGACGGC CGCTGCTGCG CGCCGACGGC CCCGACGGCG AGCTGCTGGG CGCGGTGTAC
CGGCACCGGT TCGCGCTGCA GGACCTGTTC GCGGGCCTGC TGGGCTACCG GCTGGTGGTG
GAGCGCCGGT TCGCCCGGCT GTACAAGGCC GGGCCCGGCC ACGACGACAG CCGGGGCGCG
GGCCTGACGC CGCGCGGCTA CGCGTACCTG GCGCTGGTGC TGGCCGTGCT GACCGGCGTC
GGCCGCCAGG TGCTGCTGTC GCGGCTGGTC GCCGACGCGC GGGCGGCGGC GGCCGAGGCC
GGGATCGCCG TGGTGGACGA CGTGGTGGAC CGGCGGGCGC TGACCTCGGC GCTGCGGCAC
CTGGTGGCGC TGGGCGTGCT GCACGAGACC GAGGGCTCGG TGGACGCGCA GGCCGAGGCG
CTGATCACCG TGGACACCGA CCTGCTGGGG CAGCTGCTGA CCGGCCCGGT GGGCGAGGCG
GACGGCGCGC GGCGGCTGGT GGAGCTGGCG GCGCGGCCGG GGCCCAGGGG CGTGGAGCAC
GCGGTGCGGC GCAGGCTGGT GGAGAACCCG GTGGTGCTGT ACGCGGACCT GCCGCCGGAG
CAGGCGGACT GGTTGCGGCG CAACCAGCGC AAGGAGTCGG CGCTGCTGGA GACCGCGTTC
GGGCTGCGCA CCGAGTGCCG CGCCGAGGGC GTGCTCGCCT CCGACCCCGA GGACTACCTG
ACGGACCTGT ACTTCCCCGG CACGTCGACG GTGGCGCGGA TCGCGCTGCT GGCGCTGCCG
GAGCTGCTGG AGTCGCGGCC GGTGGCGGGC GGGCGGCACC CGGTGGACCC GGCCCGCGCG
CGCGAGGTGT GCGCGGAGCT GGTGGCGGAC TACCCGGCGG CGTGGTCGAA GCAGTACGTG
GAGGACCTGG GCGGGCTGAC CGCCGAGGTG CTGGAGCTGC TGCGGCGCAC CGGGCTGGCC
GCACCGGACG CCGAGGGGCC GGGGTGGACG CTGGCGCCGA CCGCGCACCG GTGGGTCCCG
GTGCCGGACG GCGCGCCGGA GCGCGAGGTC GAGGTCGTGG CGGCGCCGGA GCCGCAGAGC
TGGTCGTTGT TCGATGAGGA GAGCGCGTGA
 
Protein sequence
MFDDLSEIDS AIVVRCARTL LRRPLLRADG PDGELLGAVY RHRFALQDLF AGLLGYRLVV 
ERRFARLYKA GPGHDDSRGA GLTPRGYAYL ALVLAVLTGV GRQVLLSRLV ADARAAAAEA
GIAVVDDVVD RRALTSALRH LVALGVLHET EGSVDAQAEA LITVDTDLLG QLLTGPVGEA
DGARRLVELA ARPGPRGVEH AVRRRLVENP VVLYADLPPE QADWLRRNQR KESALLETAF
GLRTECRAEG VLASDPEDYL TDLYFPGTST VARIALLALP ELLESRPVAG GRHPVDPARA
REVCAELVAD YPAAWSKQYV EDLGGLTAEV LELLRRTGLA APDAEGPGWT LAPTAHRWVP
VPDGAPEREV EVVAAPEPQS WSLFDEESA