Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0870 |
Symbol | |
ID | 8325033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 961174 |
End bp | 962343 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941412 |
Product | hypothetical protein |
Protein accession | YP_003098677 |
Protein GI | 256375017 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02678] conserved hypothetical protein TIGR02678 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.536869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACG ACCTCTCCGA GATCGACTCC GCGATCGTGG TGCGCTGCGC GCGCACCCTG CTGCGACGGC CGCTGCTGCG CGCCGACGGC CCCGACGGCG AGCTGCTGGG CGCGGTGTAC CGGCACCGGT TCGCGCTGCA GGACCTGTTC GCGGGCCTGC TGGGCTACCG GCTGGTGGTG GAGCGCCGGT TCGCCCGGCT GTACAAGGCC GGGCCCGGCC ACGACGACAG CCGGGGCGCG GGCCTGACGC CGCGCGGCTA CGCGTACCTG GCGCTGGTGC TGGCCGTGCT GACCGGCGTC GGCCGCCAGG TGCTGCTGTC GCGGCTGGTC GCCGACGCGC GGGCGGCGGC GGCCGAGGCC GGGATCGCCG TGGTGGACGA CGTGGTGGAC CGGCGGGCGC TGACCTCGGC GCTGCGGCAC CTGGTGGCGC TGGGCGTGCT GCACGAGACC GAGGGCTCGG TGGACGCGCA GGCCGAGGCG CTGATCACCG TGGACACCGA CCTGCTGGGG CAGCTGCTGA CCGGCCCGGT GGGCGAGGCG GACGGCGCGC GGCGGCTGGT GGAGCTGGCG GCGCGGCCGG GGCCCAGGGG CGTGGAGCAC GCGGTGCGGC GCAGGCTGGT GGAGAACCCG GTGGTGCTGT ACGCGGACCT GCCGCCGGAG CAGGCGGACT GGTTGCGGCG CAACCAGCGC AAGGAGTCGG CGCTGCTGGA GACCGCGTTC GGGCTGCGCA CCGAGTGCCG CGCCGAGGGC GTGCTCGCCT CCGACCCCGA GGACTACCTG ACGGACCTGT ACTTCCCCGG CACGTCGACG GTGGCGCGGA TCGCGCTGCT GGCGCTGCCG GAGCTGCTGG AGTCGCGGCC GGTGGCGGGC GGGCGGCACC CGGTGGACCC GGCCCGCGCG CGCGAGGTGT GCGCGGAGCT GGTGGCGGAC TACCCGGCGG CGTGGTCGAA GCAGTACGTG GAGGACCTGG GCGGGCTGAC CGCCGAGGTG CTGGAGCTGC TGCGGCGCAC CGGGCTGGCC GCACCGGACG CCGAGGGGCC GGGGTGGACG CTGGCGCCGA CCGCGCACCG GTGGGTCCCG GTGCCGGACG GCGCGCCGGA GCGCGAGGTC GAGGTCGTGG CGGCGCCGGA GCCGCAGAGC TGGTCGTTGT TCGATGAGGA GAGCGCGTGA
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Protein sequence | MFDDLSEIDS AIVVRCARTL LRRPLLRADG PDGELLGAVY RHRFALQDLF AGLLGYRLVV ERRFARLYKA GPGHDDSRGA GLTPRGYAYL ALVLAVLTGV GRQVLLSRLV ADARAAAAEA GIAVVDDVVD RRALTSALRH LVALGVLHET EGSVDAQAEA LITVDTDLLG QLLTGPVGEA DGARRLVELA ARPGPRGVEH AVRRRLVENP VVLYADLPPE QADWLRRNQR KESALLETAF GLRTECRAEG VLASDPEDYL TDLYFPGTST VARIALLALP ELLESRPVAG GRHPVDPARA REVCAELVAD YPAAWSKQYV EDLGGLTAEV LELLRRTGLA APDAEGPGWT LAPTAHRWVP VPDGAPEREV EVVAAPEPQS WSLFDEESA
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