Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0801 |
Symbol | |
ID | 8324964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 880438 |
End bp | 881028 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941343 |
Product | protein of unknown function DUF1003 |
Protein accession | YP_003098608 |
Protein GI | 256374948 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.765445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAGC CACAGGGACG ACGGCGGCTG GACCAGCCGC GCTCGGCGGG CCGGTTCCGG CTGTCGCTGG ACCCGGACGC GTTCGGCAGG CTCTCCGAGC GGCTGGCCAG GTTCCTCGGG ACGGGCACGT TCCTGTTCTG GCAGACCATC ATCGTGGTCG CGTGGATCGC GGTGAACCTG CTCGCGGTGT CGCTGCGCTG GGACCCGTAC CCGTTCATCC TGCTGAACCT GGCGTTCTCC ACCCAGGCCG CGTACGCCGC GCCGCTGATC CTGCTGGCGC AGAACCGGCA GGACGACCGG GACCGGGTGT CGCTGGAGGA GGACCGGCGG CGGGCCGAGC AGACCAAGGC GGACACCGAG TACCTGGCGC GGGAGCTGGC GGCGCTGCGG ATCGCGGTGG GCGAGGTCGC GACGCGGGAC TTCCTGCGCG GCGAGCTGGA CCGGGTGTTC CGCGAGGACC GGAAGAAGAG CGGGAAGTCG AAGAAGCAGC GCGAGGAGCG GGACGGCGAC GAGCGGGAGC CCGGCGAGGG CAAGGGGCGC AAGGACGACA GCCGGTGGGA CGACCCGAAG CTGGACGACG TCCGGTCGTA G
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Protein sequence | MPEPQGRRRL DQPRSAGRFR LSLDPDAFGR LSERLARFLG TGTFLFWQTI IVVAWIAVNL LAVSLRWDPY PFILLNLAFS TQAAYAAPLI LLAQNRQDDR DRVSLEEDRR RAEQTKADTE YLARELAALR IAVGEVATRD FLRGELDRVF REDRKKSGKS KKQREERDGD EREPGEGKGR KDDSRWDDPK LDDVRS
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