Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0791 |
Symbol | |
ID | 8324954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 869516 |
End bp | 870820 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644941334 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003098599 |
Protein GI | 256374939 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.039054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGGC TGACCACGGC CACCGCCGCG ACCGGGTTCG CGACCTTCGC CCTGCTGTAC GCGCCGCAGC CCGTGCTGCC GCAGCTGGCG GCCGAGTTCG GCCTCACCCC GAGCGGCGCG TCGTTCGCGA TCGGCGCGGC CACGGGCGCG CTCGCGCTGG CCGTGGTGCC GCTCGCGACC CTGTCCGAGC GCCTCGGCCG CAGGCGGGTC ATCGTCTGGT CGCTGGCCGT CGCCGCCGTC GTCGGGCTCC TGCTCCCACT GGCCCCGAAC TACCCGGCGT TCCTGCTCCT GCGCGTCCTG CAGGGACTGG CGACCGCGGG CGTCCCCGCC GCCGCGATGG CGTTCCTGGC CGAGGAGGTC GGCGCGCTCG GCGTCGGCGC GGCGATCGGC GCGCTGGTGG CGGGCAACAG CGCGGGCGGC ATGGTCGGCA GGCTCGTCGC GGGCGTCGGC GTCGACTGGC TCGGCTGGCG CGCCGCGCTG GCCCTGGTCG GCGCGTTCGG CGTGCTGTGC GCGGTCCTGG TGGCCCTGTT CCTCCCGGAC GGCACGACCC GCCGCGCCCC CTCCACCCGC TCCGACGTGC GCGCGGGCCT CAAGTCGGCG GTCTCGGACC CGGTGCTGCT GTGCCTGCAC GCGGTGGGCC TGCTGGGCAC GGCCGCGTTC ATCTCCCTGT TCAACGCGAT CCCGTTCCGC CTGGCCGCAC CGCCCCTGTC CCTGCCCGCG CGGTTCGCCG CCCTGGTGTT CCTGGCGTAC GCGGCGGGCG GCCTGTGCTC GGCGCTCGCG GGCAGGCTGT CCGACCGCGT CGGCCGCGCG GCGGTGGCGG TCGGCGCGCT GGGCGTGGCC GTGACCGGCG CGCTCCTGAC CCTGTCGGAC GCCCTGCCCG CCGTGGGCGC GGGCCTGCTC CTGTTCACCG GCGGCTTCTT CGCCGCGCAC GCCACCGCCA GCGCCTGGGT CGGCGCCCGC GCGCGGGCCA AGGGCCAGTC GTCGGGCGTC TACCTGTTCG CCTACTACCT GGGCAGCAGC GCGGGCGGCG CCCTGGGCGC GACGGCCTAC GCCACGTGGG GCTGGTCGGG CCTGACGGCG GCGATCACCT GCTGGCTGGC GCTGGCCGCC GCGGCGATCG CCCTGGCCCA CCTGCTCACC GCCCGCGCCA CCGCTCAGAA CTCCAGCGGC ACCACGACCC CCGCGTCCGC CGCGATCTCC ACGTCCCCCA CCCGCGGCAG CCGCTTCCGC CCGGACTCCA GCCCGAACGT CACCGACCGC GCGTCCGCGG GCACCTCCAC GACCACCGCG CCGGGGAACA CCTGA
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Protein sequence | MTRLTTATAA TGFATFALLY APQPVLPQLA AEFGLTPSGA SFAIGAATGA LALAVVPLAT LSERLGRRRV IVWSLAVAAV VGLLLPLAPN YPAFLLLRVL QGLATAGVPA AAMAFLAEEV GALGVGAAIG ALVAGNSAGG MVGRLVAGVG VDWLGWRAAL ALVGAFGVLC AVLVALFLPD GTTRRAPSTR SDVRAGLKSA VSDPVLLCLH AVGLLGTAAF ISLFNAIPFR LAAPPLSLPA RFAALVFLAY AAGGLCSALA GRLSDRVGRA AVAVGALGVA VTGALLTLSD ALPAVGAGLL LFTGGFFAAH ATASAWVGAR ARAKGQSSGV YLFAYYLGSS AGGALGATAY ATWGWSGLTA AITCWLALAA AAIALAHLLT ARATAQNSSG TTTPASAAIS TSPTRGSRFR PDSSPNVTDR ASAGTSTTTA PGNT
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