Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0759 |
Symbol | |
ID | 8324922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 837810 |
End bp | 839711 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941302 |
Product | GTP-binding protein TypA |
Protein accession | YP_003098567 |
Protein GI | 256374907 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00250463 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACGG CCACTGCGTC GATCAAGGAA ACGCTGGTCC GCAACGACCT GCGCAACGTG GCGATCGTCG CGCACGTTGA CCACGGCAAG ACCACCCTGG TCGACGCCAT GCTCCGCCAG TCAGGCGCCT TCTCCGAGCG CGCCGAGCTC GTCGACCGGG TCATGGACTC GGGCGAGCTG GAGCGCGAGA AGGGCATCAC GATCCTCGCC AAGAACACGG CTGTGCGCAG GCACACGCCG GACGGCGACA TCGTCATCAA CGTCATCGAC ACCCCCGGCC ACGCCGACTT CGGTGGTGAG GTCGAGCGCG GCCTCTCCAT GGTCGACGGC GTCGTCCTGC TCGTCGACGC CTCCGAGGGC CCGCTGCCGC AGACGCGCTT CGTGCTGCGC AAGACCCTCG CCGCGGGCCT CCCGGTCATC CTGGTGGTGA ACAAGGTCGA CCGCCCCGAC GCCCGGATCT CCGAGGTCGT CGAGGAGGCC CACGACCTGC TGCTCGACCT GGCCACCGAG GTCGGCGCCG ACGACTCCGT GCTCGACCTG CCGGTCGTCT ACGCCTCGGC CCGCGCCGGT CGCGCCTCGC TGACCCAGCC CGAGGACGGC GGCCTGCCGG ACGAGGAGAA CCTGGACAGC CTGTTCAAGG TCCTGTTCGA CTACATCCCG GCCCCGACCG GCGACGCCGA CGCGCCGCTG CGCGCGCTGG TGACCAACCT GGACGCCTCG ACCTTCCTCG GCCGCATCGC GATGTGCCGC GTCGCCGCCG GTCGGATGCG CAAGGGCGAG ACCGTGTCCT GGTGCCGCGA GGACGGCTCG GTCCAGAAGG TGCGCATCAC CGAGCTGCTG ATCACCGAGG CGCTGGAGCG CGTCCCCGCC GAGGAGGCCC GCGCGGGCGA CCTGGTGGCG ATCGCGGGCA TCCCGGAGAT CACCATCGGC GACACCCTGG CCGACGTCGA CAACCCGGAG CCGCTGCCCC GGATCACCGT CGACGAGCCC GCCATCTCGA TGACCATCGG CGTCAACACC TCGCCGCTGG CCGGTCGCAA CGGCGGCACC AAGCTCACCG CGCGCGTCCT CAAGGCCCGC CTGGACTCCG AGCTGGTCGG CAACGTGTCC GTCCGCGTGC TGCCCACCGA GCGCCCCGAC ACCTGGGAGG TGCAGGGCCG AGGCGAGCTG GCGCTGGCCA TCCTGGTCGA GCAGATGCGC CGCGAGGGCT TCGAGCTCAC CGTCGGCAAG CCGCAGGTGG TCACCAGGCA GGTCGACGGC AAGACCCACG AGCCGTTCGA GCGCCTGACC ATCGACGCCC CCGAGGAGCA CCTCGGCGCC ATCACCCAGC TCCTGGCGAA CCGCAAGGGC CGCATGGAGA CGATGGACGG CCACGGCACC GGTCGCATCA AGCTCGACTA CGTCGTGCCC TCGCGCGGCC TGATCGGCTT CCGCACCGAG TTCCTCACCG AGACCCGCGG CACCGGCATC GCGAACGCCG TCGCCGAGGG CTACGGCCCG TGGGCGGGCG AGATCCGCAC CCGCCACAAC GGCTCGCTGG TCGCCGACCG CACCGGCTCG ATCACCGCCT ACGCGATGAT CCAGCTCGCG GACCGCGGCA CGTTCTTCGT GGAGCCCGGC GCGGACGCGT ACGAGGGCAT GGTCGTCGGC GAGAACCCGC GCGCCGAGGA CCTGGACGTC AACGTCTGCC GCGAGAAGAA GCTGACCAAC ATGCGCACCT CGACCGCCGA CGTCATGGAG ACGCTGGCCC GGCCGAGGAA GCTGTCGCTG GAGGAGGCGC TGGAGTTCTG CGCCGCCGAC GAGTGCGTCG AGGTCGCGCC GGAGGTCGTC CGGGTCCGCA AGGTCACCCT GGACGCCAAC CAGCGCGGTC GCGAGCGCAA CCGCGCCAAG CTGCGCGGCT GA
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Protein sequence | MPTATASIKE TLVRNDLRNV AIVAHVDHGK TTLVDAMLRQ SGAFSERAEL VDRVMDSGEL EREKGITILA KNTAVRRHTP DGDIVINVID TPGHADFGGE VERGLSMVDG VVLLVDASEG PLPQTRFVLR KTLAAGLPVI LVVNKVDRPD ARISEVVEEA HDLLLDLATE VGADDSVLDL PVVYASARAG RASLTQPEDG GLPDEENLDS LFKVLFDYIP APTGDADAPL RALVTNLDAS TFLGRIAMCR VAAGRMRKGE TVSWCREDGS VQKVRITELL ITEALERVPA EEARAGDLVA IAGIPEITIG DTLADVDNPE PLPRITVDEP AISMTIGVNT SPLAGRNGGT KLTARVLKAR LDSELVGNVS VRVLPTERPD TWEVQGRGEL ALAILVEQMR REGFELTVGK PQVVTRQVDG KTHEPFERLT IDAPEEHLGA ITQLLANRKG RMETMDGHGT GRIKLDYVVP SRGLIGFRTE FLTETRGTGI ANAVAEGYGP WAGEIRTRHN GSLVADRTGS ITAYAMIQLA DRGTFFVEPG ADAYEGMVVG ENPRAEDLDV NVCREKKLTN MRTSTADVME TLARPRKLSL EEALEFCAAD ECVEVAPEVV RVRKVTLDAN QRGRERNRAK LRG
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